Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0864 |
Symbol | |
ID | 3834341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 1030118 |
End bp | 1031929 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637824952 |
Product | ABC transporter, transmembrane region |
Protein accession | YP_425952 |
Protein GI | 83592200 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGACG GCACAAGCGC TCGCAACGCC ATACCGGCGC GTCCCATCCT CTGGCGGCTG CTTTTCCCCG AAAGGCACAG GCTGGCCCTG GCCCTGGCGA TCACCCTGCT GGCCGCCCTC GCCGAACTGC CGCCCTATGC CTTGCTCAGT CAGTCGATCG GCCTCGCGCT GACCGGGACG GCCTCCGGCG GCGATCTGCT GGGCTTGGCG GGATGGATGG GGGCGGCCCT TCTTATCAAA TTTCTGCTCT ATAGCCTCGC CTATTATCTC AGCCACGTCG CCGCTTACCG GCTGCTCGCC GACATCCGCC AGACCCTGGT CCGTCGCCTT GCCGTCGCCC CCCTGATCTG GCTCCAGCGG CACAGTTCGG GGGATCTGAA AAAGATCGTG CTCCAGGACG TGGAGCGGCT GGAGCAATTC ATCGCCCACC ACACGGTGGA ATGTCTGGCG GCCCTCGCCA GTCCGGTTTT CGTCGCCCTG GTCCTCGCCT GGATCGATTG GCGCCTTGCC GCCGCCGCCC TGCTGACGCT GCCCCTGGCC GCCACCCTCC AGGCGCTGTT GATGCGCGGC CTGGGCCCGC GCATCGAGGA CTATGGCCGC ACCATCGGCG CGCTGAACGG AGCGACCGTC GAATACATCC GCAATGCGCC GGTCATGAAG GCCTTTTGCC AGAACGCCCG CTCCTTCGAG CACATGCGCG ATCTGTTGGC GCGCTATCAC GCCATGATCA CGGCGATGAC GCGGAAAACG GTGCCCGGCT GGTCGGCGTT CATGGTTCTG CTCGGGGCCA ATATCGTTTT TCTTCTGCCT TTTGGTTTGT GGCTCCACCG CCAGCACGCC CTTGAGCTGA CCGAGGTCAT CCTGGCCGTG ATGCTGGGAA GCGGCATGCT CAAGCCGCTG TTCAAGGTCG CCCATTTCTC CTCCGAGATC GGCGAGATCC TGGCCGGGGT CCGCCGTCTC GCCCCTTTGC TGGCCTTTCA GCCGACCGCG CCGGCGGCCG TGGCGCCAGC GCCCGCGGCG GCGGCCGATA GCGCCTTTGC CGACGCCATC ACCTTTGATC GGGTGTCGTT CTCCTATGGC GCGCGGACCA TTTTGCAAGA CGTGAGCTTT ACCCTGAAGG CGGGCGGCTT CACCGCCCTG GTCGGACCAT CGGGCGCGGG AAAAAGCACC ATCGCCCATC TCATGGGGGG GCTGGTCCTC GCCGATCGCG GCGACATCCG CGTGGGTGCG GTCAGTTTGT CCTCGTTGAG CGAGGCCGGG CGCGCCGGGC TGATCGGCGT GGCAAGCCAG GATAGCTTTC TGTTCGCCGG CACGCTGATG GACAACCTGC GCCTGGGCCG CCCCGAGGCC GGCGCAGACA TGGTTCGCCA CGCCGCGCGC ATCGCCCAGG CGGAGGATTT CATCGCCGCC CTGCCCGAGG GCTACGCCAC CACCCTGGGC GAGCGCGGCA CCCGCCTGTC CGGCGGCGAG CGCCAGCGCA TCGCCCTCGC CCGCGCCCTG ATCAGCCAAA CCCCCGTGCT CGTGCTCGAC GAGGCGACGG CCTTCGCCGA CGGCCGCACG GAACGACGGT TCTATCAGGC GCTGCGCGCG GCCTATCCCG ACCAGACGCT GCTGGTCATC GCCCACCGCC TGACCGCCAT CGCCCAAGCC GATCAGATTT TGGTTCTTGA GGACGGCCGC GTGATCGACG GCGGCCGCCA CGCCGATCTG CTCGAGCGCT GCCCGCTTTA TCAAACCCTC TGGCGGCGCC AGTTCGACAG CGAGACCTGG TCCATCCGCC CCAAGGGGAC CGCCGATGCC GCCCATTCTT GA
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Protein sequence | MTDGTSARNA IPARPILWRL LFPERHRLAL ALAITLLAAL AELPPYALLS QSIGLALTGT ASGGDLLGLA GWMGAALLIK FLLYSLAYYL SHVAAYRLLA DIRQTLVRRL AVAPLIWLQR HSSGDLKKIV LQDVERLEQF IAHHTVECLA ALASPVFVAL VLAWIDWRLA AAALLTLPLA ATLQALLMRG LGPRIEDYGR TIGALNGATV EYIRNAPVMK AFCQNARSFE HMRDLLARYH AMITAMTRKT VPGWSAFMVL LGANIVFLLP FGLWLHRQHA LELTEVILAV MLGSGMLKPL FKVAHFSSEI GEILAGVRRL APLLAFQPTA PAAVAPAPAA AADSAFADAI TFDRVSFSYG ARTILQDVSF TLKAGGFTAL VGPSGAGKST IAHLMGGLVL ADRGDIRVGA VSLSSLSEAG RAGLIGVASQ DSFLFAGTLM DNLRLGRPEA GADMVRHAAR IAQAEDFIAA LPEGYATTLG ERGTRLSGGE RQRIALARAL ISQTPVLVLD EATAFADGRT ERRFYQALRA AYPDQTLLVI AHRLTAIAQA DQILVLEDGR VIDGGRHADL LERCPLYQTL WRRQFDSETW SIRPKGTADA AHS
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