| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0838 |
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| Symbol | |
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| ID | 3834412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 996371 |
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| End bp | 998386 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637824926 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_425926 |
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| Protein GI | 83592174 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGGAC CTTTGTGCGC CGGTGGGGCG CTTATGCTGC TGACCATGGC CCCGCCGACG
ATGGCTGAGG AGGCGACGGC AGACAATGCC GAGCCCTCGG CGGGCGTCAT CACGCTTGAT
CTATTGACCG TAACCGCAAA CAAACGCCGC CAAACCGAAT TCGACGTTGC CGGCGCCGTC
AGTGTCGCAA CGGGGGATGA CCTGGAACGG GACGGGATCA CCCAAACCGA TCGTCTGGAC
GCGGTGTTCC CGGAGTTGCA GTCCATGGGG CGCAGCTCGC GTGTTTACAA CAATTTCACC
CTGCGCGGCC TTTCGTCGGC CGACTTCTAC GGACCGGCCG TCGGGCTCAA TGTGGACGGC
GTTCCCCAAT TGCCCCATAC CTACGCCCAA AGCCTGCGAA ACGCCGAGCG TGTCGAACTG
GTGAAAGGGC CGCAAGGGGC CGTCTACGGA CGGGGAGCCC TGGGCGGGGT CATCAACGTG
GAAACCGCCC TTCCCGGAGA GGAGCCGGAG GCCTGGACCG ACCTCCAGGT CTTCGGCGGC
GGCCACCGGG CTTCCGCCGG CGCCAGCAGC GGCCAATGGC GGGGATGGGC CATCCAGGGC
ATGGCCAACG ACGCCGTGGC GGGCGGATCC TTGGACGACC CGTTACGCGG GCTCAAAAAC
GTCGACGAAA GCCGCGACAC CGGCGGCCGG GTATCGTTAC ACTACCTGCC GTCGGAAGTG
CCCTTGCAGG CGCGCCTGAA GCTTGGGACC CAGCGCTACC GCTCTGAAGA AGAGTATTAC
GTGCCGCTCG ACACTCTGTC GCGAAAGCGT GTCAACCCCG TCGTCGAGAC GCCGAAGCTG
AACCGCCGCA TCGACGACGT CAGCCTGGAC GCCACCTACG ACCTCACGGA CAAATGGTCG
ATCACCGGCC TTGTCTCCTA TCAGCGCATG GATCTGGACC GCACCTTCGG TACCTATGGC
ATCGACACCA AGGAATTCCA AGACAGCCTA TACGGCGAAT TGCGAGCGGC CTACGAAAGC
GAGAGCACAT CCCTTCTGTT CGGCTACAAC GGCCAAAAGC AACACTATAA ATATGAGGAC
CTGGATTATG GTAGCGGCGT CGGCGACATG GGCGGCCCCA TGTCGGACAA CACCATGGTC
ACGCATGCGG TGTTCACCGA CGGAACCTAT CGGTTCTTGC CCCATTGGGA ACTGAGTGCG
GGCGCCCGTG TCGCCTGGGA GAAGGCGGAG TCCCTCATGA CCATCCCCGG CGCGCCCGGA
TCAAACGTCG ATCATAAAAA CGACGCCACG TTCTGGGCCG TCACCCCCCA TGCCGCCCTT
GCCTATCTTC TCACCGACGA ACACCGGTTG TGGGCCGGCG TGGGACGCGG ATATAAGCCG
GGCGGCTTCA ACAAGGCCGG GACCAGTTCC CTGGATACGG CGGCCTATGA TTCCGAGACC
GCCCTCAGTG TCGAGGGGGG ATGGAAGTAT CGATCCACCA CTGGCACGCG GCGGGCCGAG
GTTACGCTTT ACGACATCGA AAGCCAGAAC GTTCAGGGGT ATTCGGGTCC GGCCGGACTG
GAAACCCTGG GCAATATGGG CGATGCCCGC AGCCTGGGGA TTGAGGTCAA CACCGCCTTC
GTCGTGTTCG AGGATCACGA GATTTCGCTG GGGGGCATGG CGAACCGCAG CTCTTTCACC
GACGGTCCCT ATAAGGGCAA CACGGTCCCC TATGCCCCCG CTTACAGCTT TCGGGCGTCC
TGGACCAGTT ATCTCGGCAA CCGGGGCCAG TGGCAGCCCA GCGCAACCGT TCGCCATGTC
GGCGAACATT ACTTCGACAC AGACAACACG CTTCGCCAAG GCTCCTACAC GGTGCTGGAT
GCCTCGCTGA ATTACGAAAC CGATTTCGGC GTGACGGTCG GTGTCTACGG CAATAACCTG
ACCGATACGC TCTACCAAGT ATACGCCAAC CGCTCTGTTG GGGCTCAGTT GGGCGCTCCG
CGGGAAGTCG GTCTCCATCT GACCGCACGA TTCTGA
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| Protein sequence | MRGPLCAGGA LMLLTMAPPT MAEEATADNA EPSAGVITLD LLTVTANKRR QTEFDVAGAV
SVATGDDLER DGITQTDRLD AVFPELQSMG RSSRVYNNFT LRGLSSADFY GPAVGLNVDG
VPQLPHTYAQ SLRNAERVEL VKGPQGAVYG RGALGGVINV ETALPGEEPE AWTDLQVFGG
GHRASAGASS GQWRGWAIQG MANDAVAGGS LDDPLRGLKN VDESRDTGGR VSLHYLPSEV
PLQARLKLGT QRYRSEEEYY VPLDTLSRKR VNPVVETPKL NRRIDDVSLD ATYDLTDKWS
ITGLVSYQRM DLDRTFGTYG IDTKEFQDSL YGELRAAYES ESTSLLFGYN GQKQHYKYED
LDYGSGVGDM GGPMSDNTMV THAVFTDGTY RFLPHWELSA GARVAWEKAE SLMTIPGAPG
SNVDHKNDAT FWAVTPHAAL AYLLTDEHRL WAGVGRGYKP GGFNKAGTSS LDTAAYDSET
ALSVEGGWKY RSTTGTRRAE VTLYDIESQN VQGYSGPAGL ETLGNMGDAR SLGIEVNTAF
VVFEDHEISL GGMANRSSFT DGPYKGNTVP YAPAYSFRAS WTSYLGNRGQ WQPSATVRHV
GEHYFDTDNT LRQGSYTVLD ASLNYETDFG VTVGVYGNNL TDTLYQVYAN RSVGAQLGAP
REVGLHLTAR F
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