| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0678 |
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| Symbol | |
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| ID | 3834529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 800799 |
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| End bp | 802190 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637824763 |
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| Product | multi anti extrusion protein MatE |
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| Protein accession | YP_425769 |
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| Protein GI | 83592017 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.026255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCGC GGCACGCTGC CCAACAGGTT AATCCTTTTC TGACCGTCCC TATCGGGCGG
CTGTTTGTGT CAAACGCCCT TCCTATGGCC GTGGTCATGT CGATGGGCGG GGTTCTTAAT
GTTGTCGATG GGATTTTCGT CGGCCACTTC ATCGGGTCCG ACGCGCTCGC GGCGGTAAGC
TTGGCCTTTC CGGTGGCTAT GGTGCTTTCG GCGCTGACGA CCTTGACGGG CGGCGGCATG
TCGAGCCTGA TGGCGCGGTA TCTAGGTGCC GGAGATCGCG GAGCTGCCGG GCGCATCTTT
GCCGAGACCC ATGGGCTGGT GTTGGCGATT TCGGTTGGTC TTGTCGTGCT ATGGGCGGTG
GTTGGCGCTG CGCTTGTCGA CTCTATGGCC GCAGGCAATC CCAAGGTCGC CGGATTGGCG
CAGGATTATC TGCAGATCAT GATTCTTGGC GCGCCGGCGC AACTGATGCT TGGCGTCCAT
GCCGATGCCC TGCGTAACGA GGGTCGGGCT GGTCTGATCG CCGCCCTGTC CGTGTTGGTC
AATCTCTTCA ATATCGGCGC GAACGGGTTG GGGATCGTGG TGCTTGGCCT CGGGATTTCC
GGTTCTGCCC TTGGCACGGT TGCAGCGCAA GCCCTTGGCT TGGCGCTGGT GATTGGCGTG
AGGGGACATA GCAAGGGGCT GCTACCGCTG TCCGTTCTGC GCGCGCGGAA TTGGCTAGGG
GCGTGGTCAC AGATCATTCG GCTGGGCCTG CCGCTGTGCC TCAGTTTCAT CGGCATCGCC
ATGGTTGCCA GTGTCGTGAT CGTGTCCCTG CGGCTTTCTG CCGGCACGGA CTATAACGCC
TTGGTCGCCG CTTATGGCGT AGTGACGCGG CTTTTAGGCT TTGCCTTTCT ACCGCAGATG
GCAATCGCGC TCGCCACGCA AAGCATTACC GGCAACAATG CTGGTGCGGG AAGGACTGAC
CGGGCGCGGG CCGCGTTGCG GCTGGCGCTG GGAGCGGCTT TCCTCTGGTG CCTGCCGGTG
GTGTTGGCCG GAGTCTTTGC GGGAACCACT CTCGGCAGTT GGTTTAGCGA TGACCCTGCC
GTGATCGACG CCGTTGCCGA GATATTGCGG CCTATGATGC TGTTTTACGC AGCCTCCGGC
CCGGTCCTTG TCTTGGCGCT ATATGTCCAC GCTCTTGGTC AACCGGGGCG GACGGCGGCA
CTAACTTTGG TGAAGCCTTG GCTTCTGACA CCCCTGCTCA TATTGGCGCT TTCTATCGGC
TTCGGGGTGT CGGAGATGTG GTTGGCCTTT CCGATGGCCG ACGCGATCAT TCTCATGCTC
GCCGTGATGA TCGGGCGCAA CGTCCTACAC ACCGCTGGCA CACGGGCCGC CCATGCGGAG
GAAGGCGCAT GA
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| Protein sequence | MSARHAAQQV NPFLTVPIGR LFVSNALPMA VVMSMGGVLN VVDGIFVGHF IGSDALAAVS
LAFPVAMVLS ALTTLTGGGM SSLMARYLGA GDRGAAGRIF AETHGLVLAI SVGLVVLWAV
VGAALVDSMA AGNPKVAGLA QDYLQIMILG APAQLMLGVH ADALRNEGRA GLIAALSVLV
NLFNIGANGL GIVVLGLGIS GSALGTVAAQ ALGLALVIGV RGHSKGLLPL SVLRARNWLG
AWSQIIRLGL PLCLSFIGIA MVASVVIVSL RLSAGTDYNA LVAAYGVVTR LLGFAFLPQM
AIALATQSIT GNNAGAGRTD RARAALRLAL GAAFLWCLPV VLAGVFAGTT LGSWFSDDPA
VIDAVAEILR PMMLFYAASG PVLVLALYVH ALGQPGRTAA LTLVKPWLLT PLLILALSIG
FGVSEMWLAF PMADAIILML AVMIGRNVLH TAGTRAAHAE EGA
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