Gene Rru_A0546 details

Gene Information

• Locus tag: Rru_A0546
• ID: 3833653
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 643105
• End bp: 645090
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637824630
• Product: hypothetical protein
• Protein accession: YP_425637
• Protein GI: 83591885
• COG category: [N] Cell motility
• COG ID: [COG1749] Flagellar hook protein FlgE
• TIGRFAM ID: [TIGR03506] fagellar hook-basal body proteins

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.735408
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCTCT ACGGTGCTCT TTTCTCGGGC GTCTCGGGGT TGCAGGCCCA GTCCAGCGCA 
CTTGGCGCCA TCGCCGACAA CGTCACCAAC GTCAATACGG TCGGCTACAA GGGCACCAAG 
GTGAATTTCC AGACCCTGGT CACCCAGCAG GTCTCGCTCA CCGCCTATTC CCCCGGTGGC 
GTGCAGTCCA AGCCGCGCAC CGGCGTCGAT GTCCAGGGCC TGCTGCAGGC GACCACCTCC 
TCGACCGACA TCGGCATTTC CGGCCAAGGC TTCTTCGTCG TCTCCGGTCA GGCGATCGAC 
CCCACCGGCT ACGCCTATAG CCGCGCCGGA TCGTTCAAGG TCGATAAGGA CGGCTATCTG 
ATGAATTCGG GTGGCTATTA CATGCAGGGC TGGCCGCTGG ACAACTGGGA CGGCACCGCC 
GCCGCCTCGA CCGTCACCAA GAACGGCAAT GTCTATATGA AGTCTTACAA AACCGGCAGC 
GGCGACACCT ATTACATCAA TCCCAATGCC GTCGATAACA CCAATATGCG GCCGATCAAC 
CTCAACACCA TCGGCGGCAC GGCCCGCGCC ACCTCGACCC TGTCGATCGG CGCCAATCTG 
CCCTCGGCCG CTAATATCGG CAGCACGTCG AAAACCAACG CGCTGATCTT CGATAGCCTC 
GGCACCCCCC ATAACATGAA CTACACCTGG ACCAAGCGGG CCCAGAACGT TTGGGACGCC 
GAAGTCACCC CGCCCCAAGG GGCGCGCCAA GTCGATATGC TGTCGCAGAA CGGCGAGACC 
TATTTCGCCG CCGGTCGCCT GGATTTCACC AGCGTGCCCG ATGCCGGGAC CTCGGTGACG 
ATCAACATGT CGGGCACCGC CTATACCTTC AATTTCGTGG CGGGCGCCGA TTCGGCCAGC 
ACAACCCTGG CCGCCGCCGG CGCGGCCTCG CCCTTCGATA TCAGCGTCGC CGGTCGCACG 
CTGTCGCAGG TGCTCGACAA GCTGGGCGAC GCGGTCGAAA ACGCCAGCCG CAACGCCTAT 
GCGGCCGAAT ATACCATACC GGCGCCTCCT GCCGATGGCT TGGTAGGAAC CATCACCGGC 
AAGACCTTCC CGACGCGCTG GGCCGAGCGG GTGTCGGGCG AAAACGCCAT CCTCTTCCGC 
CAGGGCTCGG AATCCGACAC CATGACGGTG GATACCAGCT TGCTGAAAAC CGGCAGCCAG 
CCCGCCGTCA TCCAGACCAA CCCCATCGAT TCGGCCGGGC TGCCCCAGCC GTGGACGGTG 
CGGAAACTGG ACGGGCCAGA TGTGCTGGCT GCAGGCTTGC CGATGACCTC GCCGGCCCAA 
TGGCGCGGCT CGTGGGTGAA TTCCAACAGG GTCTCGGCCT CCGCCCGCGA TTATCCCTCG 
GCCATCACCT TCAACGGCGA CGGCACCCCC GATACCATGT TCGGCTATGA CGAGATCGGT 
GCGGCCTCAG CCCGCAGCGA GGTCCGTCTG GATTGGGGCA ACGGCGCGCT GAATATGGAC 
GGATCCTCCG CCCCGCCGGG CAGCCCGGCG ATCAGCCAGT TCTGGGGCAA TTACAATTCG 
GGCGATGGCA TCACCCAGCG TGATTCGGCC TATCAGCTCA ACTACATCAG CCAGAACGGC 
AATAAGTTCG GCAATTATTC CGGCGTGTCG ATCGGCGAGG ATGGCGTGGT CACCGCCCTG 
TTCGACAACG GCGTGACCAC CCCGATCTTC ATGATCCCGA TCGCCACCTT CGTGAATCCC 
AACGGCATGA ATTCACTGTC GGGCAATGTT TTCCAGGAAA CCGACAACTC GGGCCTACCC 
ACCGTGCGCG CCGCCGGCGA AGCCAGCGCC GGAACGGTCA ATCAGGCGAC CCTGGAAGCC 
TCGACCGTCG ATCTCGGCAG CGAGTTCACC AATATGATCA CCACCCAGCG GGCCTATTCG 
GCGGCGGCCA AGATCATCAC CACCGCCGAC GACATGCTTG ACGAGCTGAT CCGCATCAAG 
CGGTAA 

 

Protein sequence

MSLYGALFSG VSGLQAQSSA LGAIADNVTN VNTVGYKGTK VNFQTLVTQQ VSLTAYSPGG 
VQSKPRTGVD VQGLLQATTS STDIGISGQG FFVVSGQAID PTGYAYSRAG SFKVDKDGYL 
MNSGGYYMQG WPLDNWDGTA AASTVTKNGN VYMKSYKTGS GDTYYINPNA VDNTNMRPIN 
LNTIGGTARA TSTLSIGANL PSAANIGSTS KTNALIFDSL GTPHNMNYTW TKRAQNVWDA 
EVTPPQGARQ VDMLSQNGET YFAAGRLDFT SVPDAGTSVT INMSGTAYTF NFVAGADSAS 
TTLAAAGAAS PFDISVAGRT LSQVLDKLGD AVENASRNAY AAEYTIPAPP ADGLVGTITG 
KTFPTRWAER VSGENAILFR QGSESDTMTV DTSLLKTGSQ PAVIQTNPID SAGLPQPWTV 
RKLDGPDVLA AGLPMTSPAQ WRGSWVNSNR VSASARDYPS AITFNGDGTP DTMFGYDEIG 
AASARSEVRL DWGNGALNMD GSSAPPGSPA ISQFWGNYNS GDGITQRDSA YQLNYISQNG 
NKFGNYSGVS IGEDGVVTAL FDNGVTTPIF MIPIATFVNP NGMNSLSGNV FQETDNSGLP 
TVRAAGEASA GTVNQATLEA STVDLGSEFT NMITTQRAYS AAAKIITTAD DMLDELIRIK 
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