Gene Rru_A0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0497 
Symbol 
ID3834195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp582269 
End bp583369 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content67% 
IMG OID637824582 
ProductABC transporter component 
Protein accessionYP_425589 
Protein GI83591837 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGGGA TTTGCTCTAG CGGAGCCTCG ACGAACAGCA TGGCCTATCT CGATCTCAAG 
GACCTTCACA AAGCCTTCGG CGCCGCCCGG GTGGTTTCCG ACTTCACCTT GGCGGTGGAG
CGGGGCGAGT TCGTCTCGTT CCTTGGCCCC TCGGGCTGCG GCAAGACCAC GGTCTTGCGG
ATGATCGGCG GCTTTGAAAC GCCGTCCTCG GGCAGGATCC TAATCGACGG ACAGGATGTC
ACCGCCCTGA CCCCGGCGCG GCGCAAGGTC GGCATGGTCT TCCAGGCCTA TGCGCTGTTT
CCCAATCTGA CGGTGGCCGA GAACGTCGCC TTCGGTCTGA AAGTGGCGCG CGAACCCGCC
AGTCAGACCG CCCGGCGGGT CGATGAAATG CTGGAGCTGA TCAAACTGCC CCAGCTCAAG
GACCGCTATC CCTATCAGCT GTCGGGCGGT CAACAGCAGC GCGTCGCCCT GGCCCGGGCC
CTGGCCGTGC GCCCGAAGAT CTTGCTGCTC GATGAGCCGC TTTCGGCGCT CGACGCCAAG
ATCCGCGTGT CGTTGCGCGA GGAGATCCGG GCGGTTCAGC GCGAATTGGG GATCACCACG
GTTTTCGTCA CCCATGACCA GGAGGAGGCC CTGTCGATGT CGGACCGGGT GGTGGTCATG
CACAACGGCC GGGCCGATCA GGTCGGCGCC CCCTTCGAGA TCTACAACGC CCCGAAAACC
CGCTTCGTCG CGTCGTTCGT CGGCACCTTG AACCTGCTCG AGGGCGTTGC CCTCGCCCCC
GACCGCCTGA CCATCGAAGG CCAGGGCATC ACGACGACGC GCGGGCTGGC GGGCGCGGCG
GTGGGGGCGA CGGTCAGCCT CGCCCTGCGC CCCGAGGCCA TCGGCCCGCT GCCCACGCCC
GAGCGCACCA ACAAGCTGGA GGCGACGGTG GTCGATGTCG GGTTTCAAGG GGCCCTGGTG
CGGGTCAAGG TGGCGGTGGG GCGCCAGAGC CTAACCTATG TGACCTTCAA CGCCCCCAAC
AGCCCGCCGC CCGAACGCGG CACGGCGCTG ACTCTGTGGT TCGGTCCCGA TGATGTTCTA
GTGCTCGCCG ACGAGGCATA G
 
Protein sequence
MLGICSSGAS TNSMAYLDLK DLHKAFGAAR VVSDFTLAVE RGEFVSFLGP SGCGKTTVLR 
MIGGFETPSS GRILIDGQDV TALTPARRKV GMVFQAYALF PNLTVAENVA FGLKVAREPA
SQTARRVDEM LELIKLPQLK DRYPYQLSGG QQQRVALARA LAVRPKILLL DEPLSALDAK
IRVSLREEIR AVQRELGITT VFVTHDQEEA LSMSDRVVVM HNGRADQVGA PFEIYNAPKT
RFVASFVGTL NLLEGVALAP DRLTIEGQGI TTTRGLAGAA VGATVSLALR PEAIGPLPTP
ERTNKLEATV VDVGFQGALV RVKVAVGRQS LTYVTFNAPN SPPPERGTAL TLWFGPDDVL
VLADEA