| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0409 |
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| Symbol | |
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| ID | 3833820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 485980 |
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| End bp | 487104 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637824493 |
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| Product | alanine racemase |
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| Protein accession | YP_425501 |
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| Protein GI | 83591749 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCATG AGGACCGGGC GACGGCCCTT CTTACCGTCG ATCTTGATGC CATCGCCGAT
AACTGGCTGG CCCTGCGCGG CCGGCTGCGC CCCGGGGCGT CGTGCGCCGG GGTGGTCAAG
GCCAATGCCT ATGGCCTGGG GGCGCGCAAG GTCGTTCCCG CCTTGCTGGC CGCCGGCTGC
CGCGATTTCG TCGTCGCCCA GATCGACGAG GGCCTGGATA TCCTCGATCT GCTGCCCGCC
GACGCCCGCC TGTTCGTGCT CTCGGGCCCG CCCGAGGGGG CCGAGGACGA GGTGCTCGAC
AGCGCGCTGA TCCCGGTGCT CAACAGTCCC GATCAAATCG ACCGTTGGGC CAAGGCCTGC
GCGCGGGCCG GGCGCAAGGC GCCAGCCGCC CTTCATGTCG ATACCGGCAT GCGCCGCCTG
GGGCTGACGC CGCTGGAACT CGACGCCCTG CTCGCCGATC CCCGCCCGCT CGCCGCCTTC
ACCCCAGTGC TGGTGATGAC CCATCTCGCC TGCGCCGACG AGCCCGATCA TCCGCTCAAC
GCCGAGCAGC GCGCCCTGTT CGCCGCCGCC GCCGCCCGCT TCCCCGGCCT GCGCGCCAGC
CTTGCCAATA CCTCGGGCAT TTTCCTGGGC CCCGAGTGGC ATTTTGATCT GGCGCGCCCG
GGAATTGGTC TTTATGGCGG AAATCCGACC GTCGGTACAG CCAACCCCAT GCGGCAAGTG
GTTAAATTAC AAGGAAAAAT CCTGCAAGTT CGCCGCATTG ACACCCCCTT GAGCGTTGGC
TATGGTGCAA CGCATACGGC CCCGGCGGGA AGCACGATCG CAACCGTCGG TGTCGGATAT
GCCGACGGAT TTCCGCGTTC GGCGGGCAAC CGGGCCATGG GGCTTCTGGC CGGTCGATCC
GTTCCGGTCG TTGGTCGTGT GTCCATGGAT CTGCTGACCT TCGACGTATC GGATGTTCCC
GAAAACTTGG CGAGACCCGG TGCCATGATC GACCTTCTTG GACCCGATCT GAGTGTGGAC
GCCCTGGCCG ATCGCGCCGA TACGGTGTCC TACGAAATTC TCACGCGACT AGGCGCGCGC
TACCCGCGCC GCTACGGCGG GGTGAGGGAG GGGAGCGGCC AATGA
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| Protein sequence | MGHEDRATAL LTVDLDAIAD NWLALRGRLR PGASCAGVVK ANAYGLGARK VVPALLAAGC
RDFVVAQIDE GLDILDLLPA DARLFVLSGP PEGAEDEVLD SALIPVLNSP DQIDRWAKAC
ARAGRKAPAA LHVDTGMRRL GLTPLELDAL LADPRPLAAF TPVLVMTHLA CADEPDHPLN
AEQRALFAAA AARFPGLRAS LANTSGIFLG PEWHFDLARP GIGLYGGNPT VGTANPMRQV
VKLQGKILQV RRIDTPLSVG YGATHTAPAG STIATVGVGY ADGFPRSAGN RAMGLLAGRS
VPVVGRVSMD LLTFDVSDVP ENLARPGAMI DLLGPDLSVD ALADRADTVS YEILTRLGAR
YPRRYGGVRE GSGQ
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