Gene Rru_A0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0328 
Symbol 
ID3834045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp400635 
End bp401267 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content63% 
IMG OID637824410 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_425420 
Protein GI83591668 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.872355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTTC ACGAAATCTT GCTGTTCATC CCCGTCGGCC TGTTGATGGC CGTGCCCTTT 
GGTCCGAGCA ACTTTTTGGT TTTTTCCAAT GGTCTGCGCT ATGGGCCGGT GCCCGCCGGT 
TTGGCCGGGG TGGCGCGCAT CGTCGCCTTT GGGCTTTTGA TCGGCATTAC CGCTTTCGGT 
CTGGGGGCGA TGCTGTCTTC GGCGGCGTGG TTGCTGATCG GCATCAAGTG GTTCGGCATC 
GCCTATCTGG CGTGGCTTGG CATCCGCATC TGGCGCACGC CGGCGCCCGA TGTCGAGGCC 
TTGCGCTTGG TGGCGGGAGC CGCGCGGCCG CAAGGAACCT TGCGGGCGCT GCTGCGCATG 
GAATTCACCA CCGCCATCGC CAATCCCAAG GCGATCTTGT ATTTTACCGC CGCCTTTCCC 
CAGTTCATCG GCCCGGCCGA GAACTTCACC GAACGCTTCC TGACCATGGG CGCGGTGTTC 
CTGGTCTGTG AATACATCGT GCTGTGGGGC TATGGGCTGG TTGGCGCCGG GCTTGGGCGT 
ACGGGCCTGC TTGCCGGGAT GAGGGATTGG ATCAACAAGA TCACCGGCGC CAGCTTCCTT 
GGCTTCGCCG CCTGGATGGC CAGCGCCAAA TAG
 
Protein sequence
MTFHEILLFI PVGLLMAVPF GPSNFLVFSN GLRYGPVPAG LAGVARIVAF GLLIGITAFG 
LGAMLSSAAW LLIGIKWFGI AYLAWLGIRI WRTPAPDVEA LRLVAGAARP QGTLRALLRM 
EFTTAIANPK AILYFTAAFP QFIGPAENFT ERFLTMGAVF LVCEYIVLWG YGLVGAGLGR 
TGLLAGMRDW INKITGASFL GFAAWMASAK