Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0225 |
Symbol | |
ID | 3834619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 277592 |
End bp | 278266 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637824303 |
Product | metal dependent phosphohydrolase, HD region |
Protein accession | YP_425317 |
Protein GI | 83591565 |
COG category | [R] General function prediction only |
COG ID | [COG1896] Predicted hydrolases of HD superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.136482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCCCC GCCCCCCCCC CGATGGCGCC CCGAAGCCGA CCGACCCGGC CCTTCACGCC CGGCTGCGCG CCCAGGCGCC GCGCACCTGG CAACGCATGC TCTCGGGCCG GCGCCTTAAT CTGATCGATC CCTCGCCCAT CGATATCGAG ATCATCGATA TCGCGCTGGG CCTGTCGCGC AACACCCGCT GGAACGGCCA GACGATCGGC GCCCACGGCT GGTCGGTCGC CCAGCATTCC CTGCTGGTCA GCGCCATCGT CGCCGACCGC CTGGGCGCCC AGGCCGATCC CCGGTTGGTG ATGACGGCGC TGCTGCACGA TGCCAGCGAA TATGTCACCC ATGATCTGAT CACCCCGCTC AAGGCGGCGG TCGGCGATGT CTTCAAGGAA CTGGAAGATC GCCTGATGTG CGCGGTTCAC CTGCGCTTCG GCCTGCCCGC CCGCCCCGCG CCCGAGGTCA AGGCGCTGAT CAAGACCGCC GATTGGATCG CCGGGGCGAC CGAGGCCGTT CAACTGGCCG GCTTCACCGC CCGCGAGGTG AAATCGGTTC TGGGCATCGC CGAAAAGCCC CTGCGCGACG TCACGTTGGT TCCGCTGCCC GTCGCCGAGG CCCAGGCCCG GTTCCTCGAG GCCTTCCACC GCCTGGAAGC CGCCATGGAG TCTTCGTCGC GATGA
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Protein sequence | MAPRPPPDGA PKPTDPALHA RLRAQAPRTW QRMLSGRRLN LIDPSPIDIE IIDIALGLSR NTRWNGQTIG AHGWSVAQHS LLVSAIVADR LGAQADPRLV MTALLHDASE YVTHDLITPL KAAVGDVFKE LEDRLMCAVH LRFGLPARPA PEVKALIKTA DWIAGATEAV QLAGFTAREV KSVLGIAEKP LRDVTLVPLP VAEAQARFLE AFHRLEAAME SSSR
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