Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0178 |
Symbol | |
ID | 3834156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 211268 |
End bp | 211576 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637824256 |
Product | CRISPR-associated Cas2 family protein |
Protein accession | YP_425270 |
Protein GI | 83591518 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCACCC GCCGCTCCAA CGCCGAACAC GCCTATGTGG TCGCTTACGA TATCGCCGAT CCGAAGCGTT GGCGCCAGGT CTTCAAGACC ATGAAGGGCT ATGGCCAATG GGTGCAGCTT TCGGTCTTTC AATGTCGCCT GGATGGAGGA CGCCGCATCG CCATGGCCTC GATCCTCGAA AGCCTGATCG ATCGTGAAAC CGACCACGTT CTGATGCTAG ACCTTGGGCC GGCCGAGGAT GTGGATCTCG CCGTGGAAAG CCTGGGCAAG GCCTTTGAGA CGCTTGAGCG CCAAGCGATG ATCATTTGA
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Protein sequence | MGTRRSNAEH AYVVAYDIAD PKRWRQVFKT MKGYGQWVQL SVFQCRLDGG RRIAMASILE SLIDRETDHV LMLDLGPAED VDLAVESLGK AFETLERQAM II
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