Gene Rru_A0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0178 
Symbol 
ID3834156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp211268 
End bp211576 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content59% 
IMG OID637824256 
ProductCRISPR-associated Cas2 family protein 
Protein accessionYP_425270 
Protein GI83591518 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCACCC GCCGCTCCAA CGCCGAACAC GCCTATGTGG TCGCTTACGA TATCGCCGAT 
CCGAAGCGTT GGCGCCAGGT CTTCAAGACC ATGAAGGGCT ATGGCCAATG GGTGCAGCTT
TCGGTCTTTC AATGTCGCCT GGATGGAGGA CGCCGCATCG CCATGGCCTC GATCCTCGAA
AGCCTGATCG ATCGTGAAAC CGACCACGTT CTGATGCTAG ACCTTGGGCC GGCCGAGGAT
GTGGATCTCG CCGTGGAAAG CCTGGGCAAG GCCTTTGAGA CGCTTGAGCG CCAAGCGATG
ATCATTTGA
 
Protein sequence
MGTRRSNAEH AYVVAYDIAD PKRWRQVFKT MKGYGQWVQL SVFQCRLDGG RRIAMASILE 
SLIDRETDHV LMLDLGPAED VDLAVESLGK AFETLERQAM II