Gene Rru_A0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0048 
Symbol 
ID3834378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp50520 
End bp51146 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content65% 
IMG OID637824118 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_425140 
Protein GI83591388 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.075881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATTG AAACCTGGGG GCTGTTTTGC GCGGCCGTCT TCGTGCTGGC GGGAACGCCC 
GGGCCCAATA TGCTCCATGT GCTGACGCGC AGCGTTAAAT TTGGCGCGCG GCGCAGCATC 
CCGGCGATGC TCGGCTGCCT GAGCGCGCTG ATGACCATTC TTCTGGCCTC GGCCACCGGC 
TTAAGCGCCG TGCTGATCGC CGCCCCCGGG CTTTTCGAAG CCCTGCGCTA CGTCGGCGTC 
GCCTATCTGG TTTATCTGGG CGTGAAGGCG TGGCGCGGCG AGGAGGCGGC CGTTGACCCG 
GCGCTCCCGG CTTTGCCGGT ATCGATTTCG GCCTGGGCCT TGTTTCGCGG CGGCTTCCTG 
ATCGGCATCA GCAATCCCAA GGCGATCTTG TTCGCCGCCG CCTTCCTGCC GCAATTCGTT 
AGCCAGAGCG CCCCGCAGAT CCCGCAATTC GCCGTGCTGA TCGTGACCTT CGCCGCCGTC 
GAGCTGTTCT GGTATGCCAT TTACGGCATG GGTGGCCAGA AATTGGCGGG CTATCTGATC 
CGCCCGGCCT TGAAGCGCGC CTTCAATCGC CTGACCGGCG GCATTTTCAT GGGCTTTGGC 
GTCGCCCTGC TCCGCGTGCG GTTCTAG
 
Protein sequence
MTIETWGLFC AAVFVLAGTP GPNMLHVLTR SVKFGARRSI PAMLGCLSAL MTILLASATG 
LSAVLIAAPG LFEALRYVGV AYLVYLGVKA WRGEEAAVDP ALPALPVSIS AWALFRGGFL 
IGISNPKAIL FAAAFLPQFV SQSAPQIPQF AVLIVTFAAV ELFWYAIYGM GGQKLAGYLI 
RPALKRAFNR LTGGIFMGFG VALLRVRF