| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0395 |
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| Symbol | |
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| ID | 3828419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007633 |
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| Strand | + |
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| Start bp | 487883 |
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| End bp | 488851 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 4 |
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| GC content | 24% |
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| IMG OID | 637823552 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_424375 |
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| Protein GI | 83319260 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.134097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAA TAACTCTTAA TTCAGTAAAT ACAACTTTAA GATTAGATAA ATTGCTAGTT
GAATTATTAA CTAGTTATGA TTATTCAAGA AGTTATATTC AAAAACTAAT TAAAGAAGAG
TGTATTAGTG TTAATAATCA AATTATTACT AGTAATAATT TTTTAGTTAA ACCAAATTCA
CAAATTATAA TTACTATAAA AGATCCTGTT TTAGATCCAA ACATAACTAA AAACAAAGAT
CCTGTTTTAG ATCCAAACAT AACTAAAAAC AAAGATATTG ATTTAAATAT TATTTATCAA
GATGATGATT TATTAGTTAT TAATAAACAA AATAATATAA CAGTACATCC AAGTTTAAAT
AATACAAATA ATACAATTGT TAATGCTTTA TTAGCAAGTG ATGTTGAACT TTCATCAATT
AATGGTGAGT TACGTCCTGG AATTGTACAT AGAATTGATA AACAAACCAC AGGTTTATTA
ATTGTTGCAA AAAATGATAA AACTCATAAA TTATTAAGTG AAATGTTTAA AAACCATCAA
ATTTATAAAG AATATTTAGC AATTGTAACT GGAGTAATTA AGCCAAATAA AGGTTTGATT
GATGCTCCAA TTGGTAGAAG CCAAACTGAT CGTAAAAAAA TGAGTGTTAC AGCTAAAAAC
TCAAAACATG CAATTACAAC TTTTGAAGTA GTTGAACGAT TTTTAAAAAA TACTTTAATA
AAATGCCAAA TCCAAACTGG AAGAACTCAT CAGATTAGAG TGCATTTTAA CTATATTAAT
CACCCTGTTT TAAATGATCC AATTTATGGT AAAAAACACC AAGAATTTAC TGATTTTGGT
CAATACCTTC ACGCTTATAA ATTAAAATTT ACTCATCCAA TTACAAAAAA AGAAATTGAA
TTAATATCAC CTCTTCCTAA AGAATTTGAT GATAAAATTA AAGAATTAAG GGGTGAAAAT
AATGACTAA
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| Protein sequence | MNKITLNSVN TTLRLDKLLV ELLTSYDYSR SYIQKLIKEE CISVNNQIIT SNNFLVKPNS
QIIITIKDPV LDPNITKNKD PVLDPNITKN KDIDLNIIYQ DDDLLVINKQ NNITVHPSLN
NTNNTIVNAL LASDVELSSI NGELRPGIVH RIDKQTTGLL IVAKNDKTHK LLSEMFKNHQ
IYKEYLAIVT GVIKPNKGLI DAPIGRSQTD RKKMSVTAKN SKHAITTFEV VERFLKNTLI
KCQIQTGRTH QIRVHFNYIN HPVLNDPIYG KKHQEFTDFG QYLHAYKLKF THPITKKEIE
LISPLPKEFD DKIKELRGEN ND
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