| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0252 |
|---|
| Symbol | uvrC |
|---|
| ID | 3828962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007633 |
|---|
| Strand | - |
|---|
| Start bp | 305640 |
|---|
| End bp | 307394 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 21% |
|---|
| IMG OID | 637823411 |
|---|
| Product | excinuclease ABC, C subunit |
|---|
| Protein accession | YP_424239 |
|---|
| Protein GI | 83319764 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
|---|
| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.839249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAA AAGAACAAGT TGACTTATTA ACAAACAAAC CTGGTTGTTA TTTATTTTTA
AATAAAGATA ATGAAGTTAT TTATGTAGGA AAAGCTAAAA ATTTAAAAAA AAGAGTTAGT
ACTTATTTTA ATAAGGCTTA TAATATAAAG ACAACAAGAC TAATTAGAGA AATTACTCAC
TTGAAGTATT TTATTGTTGA TAATGAAAAA GAGTCATTAC TTTTAGAAAA AAACTTAATT
AAAAAGTATC GCCCTAAGTA TAATGTTTTG TTAAATGATG ATAAGACTTA TCCATACATA
ATAATTACTA ATCAAAAAGA TCCAATGTAT AAATATGTTA GAAAATATGA AAAAAAAGCT
CTAAGAAATT ATGGTCCTTT ACCAATTGGA AGTAATGCTA GATCTATTTT ATTAACACTA
CAACGTTTGT TTCCTTTAAG AATGTGTAAA GGTGATTTGA AAAAACCTTG TTTGTATTAT
CATTTAAACC AATGTTCTGG AGCTTGTTTT AAAACGGTTG ATTCTAGTTA TTATGAATAT
CAAATAAAAC AAGTTGACAA ATTTTTTAAA GGTGAAATTA ATCAAGTAAA ACAAACTTTA
GTAAAACAAA TGCAAAAAGC TAGTGATAAT TTGCAATTTG AACAAGCAAA AAGAATTAAA
GATCAAATTA CTAGTTTAGA TTTTATTACT GCAAAACAAA ATGTAGATAT TGTTACAAAT
AAAAATATTG ATGTAGTTAA TTATGAAATT AATGAAGAAA AAATTTGTTT TGTGATGTTG
TTTTATAGAT TAGGTCAATT AACTTATAAA GATGAATATA TTCAAAATTA TGAAGGTCAA
GATTTAGATG AATTATTAAA TAGCTATTTA CAACAAATTT ATCAAAAAAA TCTTTATCCT
GATGTATTAT TAATTCCAAA CGAAATTGAC TTATTAGATT TAGATGAAAA TTTATTGGAA
TTTAGTTCTT ATAGTTTTAA TAATCAAGAT GATATTTTTA TAAAATTAGC AAAACAAAAT
GCAGTTGATA GCTTAAATAA ATCTATTCTT TCAAATAATG TAAATAGTGG AGATGAGCTT
GAAATTTTAG ATCAACTTCA ACAAATATCA AATATTAATA AATATCCAAA ACGTATTGAA
ATTTTTGATA TTTCAAATAT TTATAATCAG TTTATAACTG GAGCTTGTAT AGTTTATATT
AATGCAAAAC CAGTTAGAAA TGAATTTAGA AAATATAATA TTGATTCTCA ATACACTTCA
GATTATGCAA GAATGAAGTT TATGTTAGAA AAAAGGTTTT TAAAAAGAAT AAAAGAAAAA
GAACAATTAC CAGATCTTAT TATTGTTGAT GGTGGTATTA TTCAAATTCA TGCAGCTAAA
GAAGTTTTAA ATAAATTGAA TTTAAAAATT AATGTAATTG GTTTAAGTAA AGATAATAAT
CATAAAACTA GATATTTAAT TGATATTTTT GAGCAAACTA TTGATATTAA AAACTTTAAA
AAATTGTATA ATTTTTTAAC AAGTTTACAA ATTAGAGTTG ATGAATATGC AAAGTCTGGA
TTTAGAAAAA AATACCACAA TCAGTTAAAT GATCAAATCC TTTTAATAAA AGGTGTTGGT
AAAAAAACTA ATTTAAAATT ATATAAGCAT TTTAAAACAA TTGATAATAT TAAAAACGCT
AGCTTTGATG AACTAAACAA AATTATTAAT AATAAAAAAA TTACTAACTT AATTATTAGT
AATTTTAAGA AATAA
|
|---|
| Protein sequence | MNLKEQVDLL TNKPGCYLFL NKDNEVIYVG KAKNLKKRVS TYFNKAYNIK TTRLIREITH
LKYFIVDNEK ESLLLEKNLI KKYRPKYNVL LNDDKTYPYI IITNQKDPMY KYVRKYEKKA
LRNYGPLPIG SNARSILLTL QRLFPLRMCK GDLKKPCLYY HLNQCSGACF KTVDSSYYEY
QIKQVDKFFK GEINQVKQTL VKQMQKASDN LQFEQAKRIK DQITSLDFIT AKQNVDIVTN
KNIDVVNYEI NEEKICFVML FYRLGQLTYK DEYIQNYEGQ DLDELLNSYL QQIYQKNLYP
DVLLIPNEID LLDLDENLLE FSSYSFNNQD DIFIKLAKQN AVDSLNKSIL SNNVNSGDEL
EILDQLQQIS NINKYPKRIE IFDISNIYNQ FITGACIVYI NAKPVRNEFR KYNIDSQYTS
DYARMKFMLE KRFLKRIKEK EQLPDLIIVD GGIIQIHAAK EVLNKLNLKI NVIGLSKDNN
HKTRYLIDIF EQTIDIKNFK KLYNFLTSLQ IRVDEYAKSG FRKKYHNQLN DQILLIKGVG
KKTNLKLYKH FKTIDNIKNA SFDELNKIIN NKKITNLIIS NFKK
|
|---|
| |