| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCAP_0222 |
|---|
| Symbol | thrS |
|---|
| ID | 3828379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007633 |
|---|
| Strand | + |
|---|
| Start bp | 266899 |
|---|
| End bp | 268818 |
|---|
| Gene Length | 1920 bp |
|---|
| Protein Length | 639 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 24% |
|---|
| IMG OID | 637823381 |
|---|
| Product | threonyl-tRNA synthetase |
|---|
| Protein accession | YP_424209 |
|---|
| Protein GI | 83319726 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0441] Threonyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA AATTATTAGA TGGTTCAATT AAAGAATATA ATCAAGAAAT TTCAGTTAAA
GATATTAGTC TAGAAATAGG TTTAAAAAAT GTAATTGGAG CTAAAATTAA TGATCAATTA
TTTGATATTA ATTATTTAAT TAAAAATGAT TGTGACTTAG AACTAATTAC AAATAAAAGT
AAAGAATATG ATTTAATGTT AAATTTAACT GCAGCTTTTA TTACAAGTTA TGCAATTAAT
AATTTGAAAT CAATTAGCCA AGCAGAAATT TTTTATAATG CTGATGAAAT GGAATTTTCA
ACAACATTTA ATACTGAACC TAGATTAGTT TTAGATGATT TAAAAAATAT TCAAACTAAT
ATTAATAACT TATTAACTTC TAATTTAGAA ATTAAATCAA ATATTTATGA TTTAAATAAG
GCATTAGAAA TTTTAAATAA TGATTATCAA AAATATTTAG CAAAGCAAAT GTATGAAAAA
TATCATTATG TAAAAGTTTA TAGTATTAAT GATTTTTATA TGGTTGTAAA TAAAGCTTTA
ATTTTAAATT CTAACTTTAT TAAAATTATT GATATTGAAC AATTAACTGG ATCTTATTGA
TTAAATGACA AAAATAACAT TATGTTACAA AGAGTTCATG GACTATGTGC AACTTCAAGT
AGTGAATTAA AAAATAAAAA AGTTATTTTA GAAGATAGAA GAAGTAGAGA TCATCGTTTA
ATCAATAAAA GATTAAATAT TTTTGGGTTT GATCAACTTG TTGGAGCAGG ATTGCCTTTA
TGATTACCAA ATGGATTTAT TGTTAAAAAT GAAATTGAAA AATATTTAAG ACAAAAAGAA
TGAGAATATG ATTATATTCC AGTAGAAACT CCACCAATTG GAACTGTTGA ACTATATAAA
ACTAGTGGTC ATTGAGATCA TTATGGTGAA GATATGTTTC AACCTTTTAA TGGTGGAAAA
GGTAGTGATG AACAATTTAT TTTAAGACCT ATGAATTGTC CTCATCATAT TGCAGTTTAT
AAACAAGAAC AAAGAAGTTA TCGTGATTTA CCTTTAAGAA TTTGTGAGCA CGCTATTCAA
CACCGTTTTG AATCAAGTGG TTCATTAACT GGATTAGAAA GAGTTAGAGG AATGAAACTA
ACTGATTCAC ACATTTTTGT AAGAAGCGAT CAAATTGAAG ATGAGTTTAG ATCAACTTAT
AAATTAATTA GTGAAGTTTT AAAAACATTT AATATTCAAA TTGATTATTT AAGTTTAAGT
TTAAGAGATC CAAATGATAA AGTTAAATTT TATAAAGATG ATTTAATGTG AGATAAAGCT
GAATCTAGTT TAGAAAAAGT ATTAATTGAT TTAGGTTTAA AATATGAAAA ACGTATTGGA
GATGCTGCTT TTTATGGTCC TAAATTAGAT ATTCAAATAA AAACTGCTCA AAATCATGAA
ATTACAGTTT CAACTATTCA ACTTGACTTT TTAATGCCAA ATAAATTTGA TTTAACTTAT
ATTGATAAAG ACCAAAAACT AGTTCGTCCA ATTATGATTC ATCGTGGATT AATTGGAACT
TATGAAAGAT TTATAGCAAC TTTATTAGAA CAAACTAAAG GTGTGTTACC TTTATGATTA
GCTCCAAAAC AAGTTGAAAT TATTCCAATT AGTGAATCTA ATTTAGAATA TGCTAATCTA
ATTCATCAAA AACTAAAAAA AGAATTTATT AGATCACATA TTGATTTAAG AGATGAAAGA
TTAAGTTATA AAATAAGAGA TGCCCAAACT AAAAAAGTTC CATACCAACT AGTTTTAGGT
AATAAAGAAG TTGAAAATAA CACTATTACT TATAGACAAT ATGGAAGTGA TGCTCAAATT
ACTGTATCAA TCCAAGAATT TATTGATATG TTAAAACAAC AAATTAATGA TAAAAAATAG
|
|---|
| Protein sequence | MKIKLLDGSI KEYNQEISVK DISLEIGLKN VIGAKINDQL FDINYLIKND CDLELITNKS
KEYDLMLNLT AAFITSYAIN NLKSISQAEI FYNADEMEFS TTFNTEPRLV LDDLKNIQTN
INNLLTSNLE IKSNIYDLNK ALEILNNDYQ KYLAKQMYEK YHYVKVYSIN DFYMVVNKAL
ILNSNFIKII DIEQLTGSYW LNDKNNIMLQ RVHGLCATSS SELKNKKVIL EDRRSRDHRL
INKRLNIFGF DQLVGAGLPL WLPNGFIVKN EIEKYLRQKE WEYDYIPVET PPIGTVELYK
TSGHWDHYGE DMFQPFNGGK GSDEQFILRP MNCPHHIAVY KQEQRSYRDL PLRICEHAIQ
HRFESSGSLT GLERVRGMKL TDSHIFVRSD QIEDEFRSTY KLISEVLKTF NIQIDYLSLS
LRDPNDKVKF YKDDLMWDKA ESSLEKVLID LGLKYEKRIG DAAFYGPKLD IQIKTAQNHE
ITVSTIQLDF LMPNKFDLTY IDKDQKLVRP IMIHRGLIGT YERFIATLLE QTKGVLPLWL
APKQVEIIPI SESNLEYANL IHQKLKKEFI RSHIDLRDER LSYKIRDAQT KKVPYQLVLG
NKEVENNTIT YRQYGSDAQI TVSIQEFIDM LKQQINDKK
|
|---|
| |