| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2600 |
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| Symbol | |
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| ID | 3775197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2681983 |
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| End bp | 2682813 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637801054 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_401617 |
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| Protein GI | 81301409 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.400593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTAG CCGCGCAAGG GCCCCTCGAT CCTCGCCTGG CGATCGCAAC TCTCATCGGT
GGAGGCTTGG CTGCCGCCGC CGCCAACACT CTCAACTGCC TCTACGATCG CGACATCGAC
GCGATCATGG AGCGCACGCG CTGGCGTCCC TTACCCTCGG GCCGGATTCA ACCGTTCGAA
GCTTGGGCCT TTGCCCTTTC CTTGGCGGCC CTGTCCTTCA TCCTGCTCGA CTGGCAGGCC
AATCAACTAG CCGCCGGTCT GGCACTGGCT GGAATTGTTT TCTACGTCGT GATCTACACC
CACGGCCTCA AGCGCCACAG TTCCCAGAAC ATTGTGATTG GAGGCGCTGC CGGCGCAATT
CCGCCCTTGG TGGGTTGGGC GGCCGTCACG GGTGAGTTGG CTTGGCCCGC TTGGATCCTG
TTTGCCATTG TCTGCCTCTG GACGCCGCCT CATTTTTGGG CGCTGGCTCT GATGATTCGC
GATGATTATG CGGCGGTCAA AGTGCCGATG TTGCCGGTCG TGGTGGGTAA TGCAGCGACG
GCGCAGCAAA TTTTGGCCTA TGCCGGTCTG CTCTTGCCGA CTACGCTGGC CTTGGCTTGG
CCACTCGGGG CGGCTGGCCC CTTCTATAGT GCAACGGCGC TTTTGCTGGG ACTGGAACTG
TTACGGCGAT CGCGGCAACT CTGCCAAGCC CCAGATTCTC GTCCCCTAGC GCGATCGCTG
TTCAAGTTCT CGATTTTTTA TCTGATGCTG CTCTGCGGAG CGATCGCCAT GGATTGCCTA
CCGGGAGCCC CCAGCCTCAG CCAAGCGATC GCGGCCTGGC CAGGCTTCTA G
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| Protein sequence | MGLAAQGPLD PRLAIATLIG GGLAAAAANT LNCLYDRDID AIMERTRWRP LPSGRIQPFE
AWAFALSLAA LSFILLDWQA NQLAAGLALA GIVFYVVIYT HGLKRHSSQN IVIGGAAGAI
PPLVGWAAVT GELAWPAWIL FAIVCLWTPP HFWALALMIR DDYAAVKVPM LPVVVGNAAT
AQQILAYAGL LLPTTLALAW PLGAAGPFYS ATALLLGLEL LRRSRQLCQA PDSRPLARSL
FKFSIFYLML LCGAIAMDCL PGAPSLSQAI AAWPGF
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