Gene Synpcc7942_2586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2586 
Symbol 
ID3775183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2670355 
End bp2670792 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content47% 
IMG OID637801040 
Producthypothetical protein 
Protein accessionYP_401603 
Protein GI81301395 
COG category[S] Function unknown 
COG ID[COG2149] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.862205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCT CTTCTTCCAA AGAGACCAAT CAAGACAAGG TGAGTGAGTC TCCGACTCGG 
CCTCAGAATC TCAACCGGAT TCGCGATCAT CTTGCCAATG AACGCACCTA TCTCGCTTGG
ATGCGAAGTG CCATCGCTTT AATGGGTTTT GGCGTTCTCA TTGTCCGCCT CAGGATTTTG
CGGCCTCCGA TTGCCCCCCA AGCACCAGGC AACGCTTGGA AGCTAGGTTT GGCTTTTTCC
ATTGTTGGCT TGCTGATGGT TTTGCTATCG ACCCAACATT ACTTTGGTGT CAGAAATGAC
ATTGAGCTTG ACACCTATAA CCCACCCGAT CGCTGGGTAA TCCTCTCAAG TATTACGATC
TTAATTCTGG GGATTGGCGT GATCTACTAT ATTTTCTCAG CTCCATTAGA TACTCTCAAT
ATGGTCATTT TTGAGTGA
 
Protein sequence
MISSSSKETN QDKVSESPTR PQNLNRIRDH LANERTYLAW MRSAIALMGF GVLIVRLRIL 
RPPIAPQAPG NAWKLGLAFS IVGLLMVLLS TQHYFGVRND IELDTYNPPD RWVILSSITI
LILGIGVIYY IFSAPLDTLN MVIFE