Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2520 |
Symbol | |
ID | 3774540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2601979 |
End bp | 2602689 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637800969 |
Product | hypothetical protein |
Protein accession | YP_401537 |
Protein GI | 81301329 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.220081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTC CCGACTGTAA CCCCCACAAA GACCTGCTCG AACGCGTACT GCGCGACAGT GTTTTTGATC TCTGGGCCAT GATCGATCGC ATCCTGATGC TGCCACGGTT GCCCCACGAT CGCTTTTGTG TGTGTATTTT TGGCTCGGCA CGGCTCATGG CCGATAATCC GGTCTATCAG GATGTGCAAT GGCTTGCTCA GGAGCTGACC TACCTAGGCT GCGACATTGT CACAGGTGGT GGGCCCGGTT TGATGGAAGC GGCGAATGCT GGCAGTGTCA GTGCAGACCC TGAAAATCGA ACGCGATCGG TGGGGCTCCG CATTGACCTT CCCCACGAAC AGGGCAGTAA TCCCTACGTT GAAGAGCTGT ACGAACACAG CAACTTTTTC TCAAGACTCC ATCACTTTGT TTTAGAGGCA GATGCTTTCG TGGTGATGCC TGGTGGAATT GGCACGCTGC TAGAGCTGGT GACTATCTGG CAACTCCTAC AAGTGTCTAA GCTGCCGCCA ACACCCCTGA TTTTGGTGGG CTCGATGTGG CGTGACTTCT TGATCTGGGC CAATGCTGCC ATGGCTAAAG GGCAACCAGC TCTCGCCAGT GAAGTGGATT TAGAAATTCC AATTGCGGTT GAGCAGGTAT CCGAAGTTTT ACCTTTGTTA CGACAAGCGC AAACTCGCTG GCAACAAAGC TGCCCAATCA TCACTAATTA G
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Protein sequence | MSAPDCNPHK DLLERVLRDS VFDLWAMIDR ILMLPRLPHD RFCVCIFGSA RLMADNPVYQ DVQWLAQELT YLGCDIVTGG GPGLMEAANA GSVSADPENR TRSVGLRIDL PHEQGSNPYV EELYEHSNFF SRLHHFVLEA DAFVVMPGGI GTLLELVTIW QLLQVSKLPP TPLILVGSMW RDFLIWANAA MAKGQPALAS EVDLEIPIAV EQVSEVLPLL RQAQTRWQQS CPIITN
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