Gene Synpcc7942_2511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2511 
Symbol 
ID3774531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2590256 
End bp2590759 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content60% 
IMG OID637800960 
Producthypothetical protein 
Protein accessionYP_401528 
Protein GI81301320 
COG category[S] Function unknown 
COG ID[COG4276] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00773693 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCCGAT TCCAGCGATC GACCGTCATT GATGCCCCGC GCGAACTCGT CTGGGCGTTC 
CACGAGCAAG CGGATGTTCT GGAGCAACTA ACGCCGCCTT GGTTGCCGGT GGAAGTGGTA
CGGCGTGAAG GTGGTCTGGG TCCTGGCGCT GTCTCAGAGT TTCGACTCTG GTTAGGCCCA
GTGCCGATTC GCTGGGTTGC CACCCACAAT GATGACTATG AGCCGGGGCG TTGTTTCTGC
GATCGCCAGA GCCAAGGGCC GTTTGCTGAT TGGCTACACC GGCACATCTT TAGCCGCGAG
GGCGATCGCA CTCGCCTGAT TGATGAAGTC GAATATGCAC TGCCCGGTGG CTGGTTGCCG
GAGTTGAGCG TTGGCCCCGT GGTCGATGCG CAGCTGGAGC GGCTATTTGC CTACCGCCAA
CAGGTTACCA AGCAATGGTG CGAGAGTCGC CGCGATGCTT TCCTGCAGTC TAATCGCACA
ACAAAAGGGC TGCAATCGCT CTAG
 
Protein sequence
MRRFQRSTVI DAPRELVWAF HEQADVLEQL TPPWLPVEVV RREGGLGPGA VSEFRLWLGP 
VPIRWVATHN DDYEPGRCFC DRQSQGPFAD WLHRHIFSRE GDRTRLIDEV EYALPGGWLP
ELSVGPVVDA QLERLFAYRQ QVTKQWCESR RDAFLQSNRT TKGLQSL