Gene Synpcc7942_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2506 
Symbol 
ID3774526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2586799 
End bp2587497 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content57% 
IMG OID637800955 
Productphosphoadenosine phosphosulfate reductase 
Protein accessionYP_401523 
Protein GI81301315 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02057] phosphoadenosine phosphosulfate reductase, thioredoxin dependent 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0641444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCTT TGCTGCCCAG CCTGACCGAA ATCAATGCCC AGCTTGCTGA TCAAGCAGCA 
ACGCAGATCA TTCAGTGGGC AGCAACTGAA TTTGGATCGG GGCTGGTGCT CAGCACGAGT
TTTGGCATTC AGTCGGCGGT GATGCTGCAC TTGGCGACTC AGGTGCAGCC GGATATTCCG
GTGATCTGGA TCGACACGGG TTATCTGCCT ACGGAAACCT ATCGGTTTGC GGCAGAGCTG
ACGGAACGGC TCAAGCTGAA TCTGAAGGTC TATCAATCGG AGATCAGCCC GGCGCGGATG
GAAGCGCTCT ATGGCCGGCT CTGGGAAAGC GAGTCGGTGG AAGACTTCAA CCGCTATGAC
CAAATGCGCA AGGTGGAGCC GATGAATCGT GCCCTGCAAG AACTGGGTGC AACGGCTTGG
TTGTCGGGCG TACGACGGCA GCAAACGGCG CATCGCCAGT CAATGGAAAT TGTCGAACTC
AAACGCGATC GCTATGCGAT TCGGCCGATT CTTGGTTGGC ACTCCCGCGA CGTTTATCAG
TACCTGACTG CTCACGATCT GCCCTACCAT CCGCTCTTTG ATCAGGGCTA CGTCACCGTT
GGTGACTGGC ATTCCAGCCG CCCCCTGCAA GCAGATGACA GTGATGAGCG CAGCACCCGG
TTCCGGGGCT TGAAGCAAGA GTGTGGCCTG CACTTGTAA
 
Protein sequence
MPALLPSLTE INAQLADQAA TQIIQWAATE FGSGLVLSTS FGIQSAVMLH LATQVQPDIP 
VIWIDTGYLP TETYRFAAEL TERLKLNLKV YQSEISPARM EALYGRLWES ESVEDFNRYD
QMRKVEPMNR ALQELGATAW LSGVRRQQTA HRQSMEIVEL KRDRYAIRPI LGWHSRDVYQ
YLTAHDLPYH PLFDQGYVTV GDWHSSRPLQ ADDSDERSTR FRGLKQECGL HL