Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2473 |
Symbol | |
ID | 3774493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2555003 |
End bp | 2556391 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800922 |
Product | serine phosphatase |
Protein accession | YP_401490 |
Protein GI | 81301282 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000000579544 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGACGC TCCCCTATTT CCAACCCGCG GCTTCGCCGG CTTCGGCGGG GGAAGGTTCA GCTAGCCTTT CACCAGTCAT TGCCCTCAAG GATCTGGTCG CGCGCCTCGA TCGCGAACAG CGCAAAGCTC AGGAATTGTT GGCCTCCCTA GGGTTCGCGC TCCGCAGCTT CACCAATTTG GGCCAGTTCC TAGAACTGAT CCCACTCATT GCCAGTCGAG TCACCGACAC TGAAGGCAGT CTGTTATTGA CCTTTCGGCC CGACGGTCGC TTTTGGCAGG CGCAACTACA CTGCACTGAT CCCCGCCTTG CGGAGACCCT GAATCGAATT CCCGCAAGCT TGCCGGTTGG GACGGCTCCC AGTGGTTCCC CAACGGAAGC AATCGCTGAG ATCGATCGCC AAGTGCAACG CTGTCTAGGC CGCAACGCGC AGTTATTTGC CACCGCCGTT TTGGTGCGGA ACCAAGCCCG TGGACGGCTG TACGTCTTCA GCTTAGATGG CCAGTACAGC TGGAATGAAT CGCGTCAAAA ACTGGTTCGC TTAGTGGCGG ATCAAACTGC TGTTGCGATA GAAAATGATG CGCTGACCAC CGAGCTACGC CAAAAAGAAC GCCTCGATCG CGAATTAGAA ATTGGTGCTG AAATTCAGTT GCAATTACTG CCGAGTCAGT GCCCGGCGAT TGAAGGCTTA GAAATTGCGG CGGCCTGTCG AACAGCGAGC CGCGTGGGCG GGGATTACTA CGACTTCATT CCTACCCGCA CCCACAGCGA TGAACAGGGA CGCTTGCAGC CCGATGCAGG CTCGCCCTGG GCGATCGCAA TCGGCGACAT CATGGGCAAA GGCGTCCCCG CTGGCTTGAT CATGACGATG CTGCGCGGCA TGCTGCGGGC AGAGGTGCTG AACCGGCACC GGCCCAGTCG GGTCTTGGCA CACCTCAATC AGGTGATCTA CGCGGACCTC GAGCATTCCA ATCGCTTCGC CACGCTGTTT TACTCGGAAT ACGATCCCAG CTCGCGCTTG CTGACCTTTA GCAATGCGGC CCACAATCCA CCCCTGCTCT GGCAACAGGC AACGGGCACC CTCAAGCGCC TCGACACCTT TGGCATGATG ATTGGCCTCG AAGCCGATAA TGCCTACGCC GAACAGCACG TGCAGCTTCA GCCGGGCGAT GTGGTTCTCT ACTACACCGA TGGTTTGACC GATGCGGCTG ATCCGCGGGG TAACCGCTTC GATGAGGAGA ACGTCGCGAT CGCCTTCCGT GAGGCTTGCC GGCGACGACT GTCAGCAGAA GCCCTCCTAG CCGACCTATT CAACCGAGTC CAGCGCTTCA TTGGGCCCGA TCGCCACAAT GAAGATGACA TGACCCTCGT AGTCCTGCGG GCCGTTTGA
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Protein sequence | MTTLPYFQPA ASPASAGEGS ASLSPVIALK DLVARLDREQ RKAQELLASL GFALRSFTNL GQFLELIPLI ASRVTDTEGS LLLTFRPDGR FWQAQLHCTD PRLAETLNRI PASLPVGTAP SGSPTEAIAE IDRQVQRCLG RNAQLFATAV LVRNQARGRL YVFSLDGQYS WNESRQKLVR LVADQTAVAI ENDALTTELR QKERLDRELE IGAEIQLQLL PSQCPAIEGL EIAAACRTAS RVGGDYYDFI PTRTHSDEQG RLQPDAGSPW AIAIGDIMGK GVPAGLIMTM LRGMLRAEVL NRHRPSRVLA HLNQVIYADL EHSNRFATLF YSEYDPSSRL LTFSNAAHNP PLLWQQATGT LKRLDTFGMM IGLEADNAYA EQHVQLQPGD VVLYYTDGLT DAADPRGNRF DEENVAIAFR EACRRRLSAE ALLADLFNRV QRFIGPDRHN EDDMTLVVLR AV
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