Gene Synpcc7942_2473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2473 
Symbol 
ID3774493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2555003 
End bp2556391 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content59% 
IMG OID637800922 
Productserine phosphatase 
Protein accessionYP_401490 
Protein GI81301282 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000579544 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGACGC TCCCCTATTT CCAACCCGCG GCTTCGCCGG CTTCGGCGGG GGAAGGTTCA 
GCTAGCCTTT CACCAGTCAT TGCCCTCAAG GATCTGGTCG CGCGCCTCGA TCGCGAACAG
CGCAAAGCTC AGGAATTGTT GGCCTCCCTA GGGTTCGCGC TCCGCAGCTT CACCAATTTG
GGCCAGTTCC TAGAACTGAT CCCACTCATT GCCAGTCGAG TCACCGACAC TGAAGGCAGT
CTGTTATTGA CCTTTCGGCC CGACGGTCGC TTTTGGCAGG CGCAACTACA CTGCACTGAT
CCCCGCCTTG CGGAGACCCT GAATCGAATT CCCGCAAGCT TGCCGGTTGG GACGGCTCCC
AGTGGTTCCC CAACGGAAGC AATCGCTGAG ATCGATCGCC AAGTGCAACG CTGTCTAGGC
CGCAACGCGC AGTTATTTGC CACCGCCGTT TTGGTGCGGA ACCAAGCCCG TGGACGGCTG
TACGTCTTCA GCTTAGATGG CCAGTACAGC TGGAATGAAT CGCGTCAAAA ACTGGTTCGC
TTAGTGGCGG ATCAAACTGC TGTTGCGATA GAAAATGATG CGCTGACCAC CGAGCTACGC
CAAAAAGAAC GCCTCGATCG CGAATTAGAA ATTGGTGCTG AAATTCAGTT GCAATTACTG
CCGAGTCAGT GCCCGGCGAT TGAAGGCTTA GAAATTGCGG CGGCCTGTCG AACAGCGAGC
CGCGTGGGCG GGGATTACTA CGACTTCATT CCTACCCGCA CCCACAGCGA TGAACAGGGA
CGCTTGCAGC CCGATGCAGG CTCGCCCTGG GCGATCGCAA TCGGCGACAT CATGGGCAAA
GGCGTCCCCG CTGGCTTGAT CATGACGATG CTGCGCGGCA TGCTGCGGGC AGAGGTGCTG
AACCGGCACC GGCCCAGTCG GGTCTTGGCA CACCTCAATC AGGTGATCTA CGCGGACCTC
GAGCATTCCA ATCGCTTCGC CACGCTGTTT TACTCGGAAT ACGATCCCAG CTCGCGCTTG
CTGACCTTTA GCAATGCGGC CCACAATCCA CCCCTGCTCT GGCAACAGGC AACGGGCACC
CTCAAGCGCC TCGACACCTT TGGCATGATG ATTGGCCTCG AAGCCGATAA TGCCTACGCC
GAACAGCACG TGCAGCTTCA GCCGGGCGAT GTGGTTCTCT ACTACACCGA TGGTTTGACC
GATGCGGCTG ATCCGCGGGG TAACCGCTTC GATGAGGAGA ACGTCGCGAT CGCCTTCCGT
GAGGCTTGCC GGCGACGACT GTCAGCAGAA GCCCTCCTAG CCGACCTATT CAACCGAGTC
CAGCGCTTCA TTGGGCCCGA TCGCCACAAT GAAGATGACA TGACCCTCGT AGTCCTGCGG
GCCGTTTGA
 
Protein sequence
MTTLPYFQPA ASPASAGEGS ASLSPVIALK DLVARLDREQ RKAQELLASL GFALRSFTNL 
GQFLELIPLI ASRVTDTEGS LLLTFRPDGR FWQAQLHCTD PRLAETLNRI PASLPVGTAP
SGSPTEAIAE IDRQVQRCLG RNAQLFATAV LVRNQARGRL YVFSLDGQYS WNESRQKLVR
LVADQTAVAI ENDALTTELR QKERLDRELE IGAEIQLQLL PSQCPAIEGL EIAAACRTAS
RVGGDYYDFI PTRTHSDEQG RLQPDAGSPW AIAIGDIMGK GVPAGLIMTM LRGMLRAEVL
NRHRPSRVLA HLNQVIYADL EHSNRFATLF YSEYDPSSRL LTFSNAAHNP PLLWQQATGT
LKRLDTFGMM IGLEADNAYA EQHVQLQPGD VVLYYTDGLT DAADPRGNRF DEENVAIAFR
EACRRRLSAE ALLADLFNRV QRFIGPDRHN EDDMTLVVLR AV