| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2388 |
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| Symbol | |
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| ID | 3774672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2459162 |
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| End bp | 2460331 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637800836 |
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| Product | oxalate decarboxylase |
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| Protein accession | YP_401405 |
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| Protein GI | 81301197 |
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| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2140] Thermophilic glucose-6-phosphate isomerase and related metalloenzymes |
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| TIGRFAM ID | [TIGR03404] bicupin, oxalate decarboxylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00510235 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAAAA AGTCTAAGTT TTTTCTGGGT TTGTTAGGCG TCATCACCTG TTTTGTCCTG
ATAGGTAGTT TCTGTTTGCC CTCATTGGCA CAAACACAAA CTTGGCGATC GCTTTCCAAT
GTTGTCTGGG GAAAAGACCT CCCTGCCTTT AGCTACCCAT TCAGCAAGAC GCCACTTGTG
GACTACGACG GTGGCGTGAC TAAACAAGTG GGAACCTATA ACTTTCCTGT TAGCAAAGGA
ATGGCTGGGG TCTACATGAC TCTGAAGCCT GGAGCGATCC GAGAATTACA TTGGCATGCC
AATGCTGCAG AGTGGGCCTA CGTCATTGAA GGACGAACAC GAGTCACACT GACAAATCCA
GACGGACAAG TTCAGATCGC CGATGTTGAT CAAGGGGGGC TCTGGTATTT TCCCCGCGGC
TGGGGTCATA GTATCGAGGG AATAGGCCCT GGTACTGCCA AGTTTCTGTT GGTTTTTAAC
GACGGCACTT TCTCAGAAGG AGCGACTTTC AGCATCACAG ACTGGCTCTC CCACACACCG
ATTTCTTGGG TTCAGCAAAA CTTTGGCTGG AGTCAAGATG AAGTTGAAAA ACTTCCCAAA
AAACAAGTTT ATATCTCTCG CTATAACCCA GAGGTTAAGC CACTGGATAA AACACAATCT
AGAAACCCTA AAGTTTCTAG GATCGTTCTC CCTTATACCC ATAATCTTTT GGCTGAAAAG
CCACGCACAA GTCAGGCTGG TAATACACTC AAGCTGGCAA GTGCTAAAGA GTTTCCTGCG
AGCTTCAACA TGGCAGGAGC TCTATTGCGA TTAGAGCCCG GTGCAATGCG CCAATTGCAC
TGGCATCCGA ATGCCGATGA ATGGCAATAC GTCCTCAATG GATCGATGGA TCTAGCCGTT
TTTGCCTCTG AAGGAAAAGC GAGTATGAGC CGTCTACAGA AGGGTGATGT CGGCTACGTT
CCTAAAGGCT ATGGGCACGC GCTGCGCAAT AGCTCTGATC AACCGCTAGA TGTTCTCATT
GTCTTTAATG ATGGCGACTA TCAAAGTATT GATCTCAACG ACTGGATTAT GAGTAATCCC
AATACTGTGC TGGATGATGT CTTTCAGCTT TCTCCGCAGT TGTTAGATAA GCTGCCTAAA
GAAAGTGAGA TTCTGATTCC TCGTAGCTAA
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| Protein sequence | MQKKSKFFLG LLGVITCFVL IGSFCLPSLA QTQTWRSLSN VVWGKDLPAF SYPFSKTPLV
DYDGGVTKQV GTYNFPVSKG MAGVYMTLKP GAIRELHWHA NAAEWAYVIE GRTRVTLTNP
DGQVQIADVD QGGLWYFPRG WGHSIEGIGP GTAKFLLVFN DGTFSEGATF SITDWLSHTP
ISWVQQNFGW SQDEVEKLPK KQVYISRYNP EVKPLDKTQS RNPKVSRIVL PYTHNLLAEK
PRTSQAGNTL KLASAKEFPA SFNMAGALLR LEPGAMRQLH WHPNADEWQY VLNGSMDLAV
FASEGKASMS RLQKGDVGYV PKGYGHALRN SSDQPLDVLI VFNDGDYQSI DLNDWIMSNP
NTVLDDVFQL SPQLLDKLPK ESEILIPRS
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