| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2365 |
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| Symbol | prfC |
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| ID | 3774648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2430839 |
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| End bp | 2432509 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800813 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_401382 |
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| Protein GI | 81301174 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.100255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGTTC ATTCCTTCCT CTGCTCCTCC CCCTGGTTCC GCATGGTCAC TGACCTTCAG
AAAGAGATTC AAGAAGCCGT TCAGCAGCGC CGCAACTTTG CGATTATTTC GCACCCTGAT
GCAGGCAAAA CCACGCTGAC CGAAAAATTG TTGCTGTACG GGGGAGCCAT TCAGGAAGCC
GGCGCTGTCA AAGCAAAACG GAGTCAGCGA GCCGCAACCT CGGACTGGAT GGAGCTGGAG
AAACAGCGGG GAATTTCGAT CACCTCAACC GTGCTGCAGT TCAACTACCA CGACTGCACG
ATCAACCTGC TCGACACGCC CGGTCACCAA GACTTTAGCG AAGACACCTA TCGCACCCTT
GCTGCTGCTG ATAACGCAGT GATGCTTGAG GACGCAGCCA AGGGCTTGGA GCCGCAGACG
CGCAAGCTGT TTGAAGTCTG CCGGATGCGC AACATCCCGA TCTTCACCTT CTTCAACAAG
ATGGATCGGC CGGGGCGGGA GCCGTTGGAA CTGCTGGATG AAATCGAGCA AGAGTTGGGT
CTGCAGACCT ATGCAGTCAA CTGGCCAATT GGCTCCGGCG ATCGCTTCCG AGGGGTTTTC
GATCGCCGCA AGCAACAAGT CCACCTGTTC GAGCGCAGCG TTCATGGCAA GCGTCAGGCG
AAAGACACCA CCTTGGAGTG GGGCGATCCA CAGCTCGCGG ACTTGATCGA GCCAGATCTG
TTGCAGCAGC TGCAGGATGA ACTGGAGCTC TTGGAAGGAG TCGGCACCGA GTTTGACCTT
GAGGCGATTC ACGCCGGTCA ACTGACGCCG GTATTCTGGG GCAGCGCCAT GACCAACTTT
GGCGTGGAAC TCTTTCTTGA AGCTTTCTTG GACTACGCCC TCAAGCCAGG GGCACGCCGC
AGCAGCGTCG GCGACATGGC GCCGGACTAT CCCGAGTTCA GTGGCTTTGT CTTCAAGCTG
CAGGCCAACA TGGATCCGCG CCACCGCGAT CGCATTGCCT TTGTGCGGGT TTGTACCGGC
AAGTTTGAGA AGGACATGAC CGTGCAACAT GCCCGCAGTG GTCGTACCTT ACGCCTGTCG
CGGCCACAAA AACTGTTCGG TCAGGATCGG GAAGTTCTCG ATGATGCATA CCCCGGCGAT
GTGATCGGCC TCAATAACCC CGGAATGTTT GCGATCGGCG ACACGATCTA CACCGGCAAA
CGGCTGGAGT ACGACGGCAT CCCTTGCTTC TCACCCGAGA TTTTTGCCTA TCTGCGCAAC
CCCAACCCCT CGAAGTTCAA GCCCTTCCGT AAAGGCGTTT CGGAGCTGCG GGAAGAAGGC
GCCGTGCAGA TTATGTATTC GGCCGATAGT GCCAAGCGTG ACCCGATTCT GGCGGCCGTT
GGTCAACTGC AACTCGAAGT CGTGCAATAC CGCTTGGAGA ATGAGTACGG CGTTGAAACC
CTCCTAGAGC CCCTGCCCTT CAGCGTGGCT CGCTGGGTGG AAGGCGGCTG GGATGTTCTC
GAGAAGGTTG GGCGACTGTT CAACACGACA ACGGTGAAAG ACACCTGGGG TCGTCCGGTC
CTGCTCTTTA AGAACGAGTG GAATCTGCGA CAGATCGAGG CTGATCACCC AGAACTGCAA
CTGCGATCAG TTGCCCCCGT CGCTGCAGGC CAAGAGCCAA TTGAAGTCTA G
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| Protein sequence | MGVHSFLCSS PWFRMVTDLQ KEIQEAVQQR RNFAIISHPD AGKTTLTEKL LLYGGAIQEA
GAVKAKRSQR AATSDWMELE KQRGISITST VLQFNYHDCT INLLDTPGHQ DFSEDTYRTL
AAADNAVMLE DAAKGLEPQT RKLFEVCRMR NIPIFTFFNK MDRPGREPLE LLDEIEQELG
LQTYAVNWPI GSGDRFRGVF DRRKQQVHLF ERSVHGKRQA KDTTLEWGDP QLADLIEPDL
LQQLQDELEL LEGVGTEFDL EAIHAGQLTP VFWGSAMTNF GVELFLEAFL DYALKPGARR
SSVGDMAPDY PEFSGFVFKL QANMDPRHRD RIAFVRVCTG KFEKDMTVQH ARSGRTLRLS
RPQKLFGQDR EVLDDAYPGD VIGLNNPGMF AIGDTIYTGK RLEYDGIPCF SPEIFAYLRN
PNPSKFKPFR KGVSELREEG AVQIMYSADS AKRDPILAAV GQLQLEVVQY RLENEYGVET
LLEPLPFSVA RWVEGGWDVL EKVGRLFNTT TVKDTWGRPV LLFKNEWNLR QIEADHPELQ
LRSVAPVAAG QEPIEV
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