Gene Synpcc7942_2364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2364 
Symbol 
ID3774647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2430162 
End bp2430767 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content57% 
IMG OID637800812 
Producthypothetical protein 
Protein accessionYP_401381 
Protein GI81301173 
COG category[S] Function unknown 
COG ID[COG4293] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.14922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTTTC CGCCTCTCGA TCGCGCTTTG AAAGAATGGC CTGCCGCGAT CGCAGCCCTC 
GCCAACGGAG ACTCGATTCT GCTCCTGCGT AAGGGTGGCA TTCAGGAACC TCAAGGTCAA
TTTTGGCCTG CCACGACAGC TGTTTGGTTA TTGCCCAGCA TTGAGCATCA GCAACCCGAA
GCATTGCGAG TTCCCGCAGA AGCGATCGCT CATGAAGTAC CGGAGCAATT AGAACTGTCG
GTCTGGGCAG AAATCAGCCA AGCAATTCCT CTACCCGCTC ACTTCCCTCT GACTGACTTG
AGTGCTAGCA CGGTCTGGAC GACGGCGTTC CTCGAGCAGC GGCGGCACTG GAAACCAGAA
CAACCGCTGT GGCTTTTGGT GCTACGAACC TATCGCGTGC CAGAATCGCG ATCGCTGGCT
TGGCAAGCGT CCTACCGTGG CTGTCGCTCT TGGATTACGT TGGCAGAACC CTTGTCGCGG
CAAGATTCAG AGCCAGTGTT GAGCGATCGC GCTTTTGCTG ACCAGTGGCA GGCGATCGCC
GAAATTCTGC AGCGTGGAGG ACTAACGCTC GATGGACTAC CAACAGCAGC TCACGCAGCT
GATTGA
 
Protein sequence
MVFPPLDRAL KEWPAAIAAL ANGDSILLLR KGGIQEPQGQ FWPATTAVWL LPSIEHQQPE 
ALRVPAEAIA HEVPEQLELS VWAEISQAIP LPAHFPLTDL SASTVWTTAF LEQRRHWKPE
QPLWLLVLRT YRVPESRSLA WQASYRGCRS WITLAEPLSR QDSEPVLSDR AFADQWQAIA
EILQRGGLTL DGLPTAAHAA D