Gene Synpcc7942_2357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2357 
Symbol 
ID3774640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2423001 
End bp2424446 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content59% 
IMG OID637800805 
Producthypothetical protein 
Protein accessionYP_401374 
Protein GI81301166 
COG category[S] Function unknown 
COG ID[COG1649] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAGA GTGGACCCAT GCCTGCTTCG CTTCGACGGT GGTTGAGTGG CATCGCAGCG 
ATCGCCTGTC TGCCTCTGCA GAGCCCTGCC GTCAATGCCC AGATTGCACC GGCACCTAGC
ACAGGCTACA ACTGCGATTT GGCGCTCTAC TCCGTGCCCC AAGCGAACCT ACTAGCGCGA
TCGCTCCAAG GCGACACGGT GGCCGACCAG CAGTATCGAC AACTCGTGCG CGAGCTAGCG
ATGGAACTGC GCAACTGTCG GCAACAGGTC TGGCCCCGCA AAATGGCGAT CTGGGTCAGA
CTATACAGCT GCGACCTGCG GCCGGGCGGC TTAGACTCCC TGTTCGATGG CCTGCAAGCA
TTGGGTTACA ACGAAGTTTT CATCGAAACT TTCTATGATG GCCGGGTGCT GCTGCCCGCT
GCCGACAACC CCACAGTTTG GCCGTCTGTG GTGGCAGAAC CGGGATTAGA ACGTGTCGAT
CTTCTAGCAG AAGCCATCCG CAAAGGGCGG GAGCGGGGCA TGTCAGTCTA TGCCTGGCTG
TTCACCCTCA ACTACGGTTA CAGCTACAGC CAGCGCAGCG ATCGCCAAGA CACCCTAGCT
CGCAATGGCC GCAGCGAGAG CAGTCTCGAA ATTGTGTCAG GAGGTGCGCA GGTCTTTGTC
GACCCCTTTA ATCCCGTCGC CCGGCAAGAC TACCAAACCT TACTGCGATC CGTTCTGAGC
CGTCGCCCGG ATGGGGTGCT GTTCGACTAC GTTCGCTACC CTCGAGGCAC AGGGGCTGCA
TCGGTGATGA CAAAAGTGGC TGATCTCCTG ATTCATACGA CTGCTGCCCG TCAGGCTTGG
ATCAATCAGC TCAACACGCC GGCAGGTCAG GCGTTGCTCA CGGAATATCT CGATACGGGA
CGCCTCAGTC CAAGCGATCG CAACCAACTG GTGCTGTTGT TGGGCGATCG CCTCAAGGAA
CTCAACCTAC GACAGGACGT AGATCCACTC TGGTCATTGG CCGTCTATCA TGCCTGGCGC
GGTGTGGTGG AATTTGTCGA TGAGGCTGTG GGCACGGTTG CGCAGGCAGG TCTGCCTTCC
GGGGCCGTCT TCTTCCCCTT TGGCAATGCG CGGGTAGGGC AGCAGGGTTG GGACTCCCGC
ATGCAGCCTT GGGACCGATT CCCCAACAGC ATGGAATATC ACCCGATGAG TTATGCCCTC
TGCGGCGATC GCCACGACTG CGTGATGGCA GAAGTGCAGC GGGTTTTGGA GGCGAAACCT
AACTCAATCG TTCAACCCGC GATCGCAGGC ACTTGGGGCG CCAACTTTAA TGCCCATCTA
CCCCTCGAAC AGCGCATGGC CGCGCTCCGG TCAACCTTCG GCGATCGCAT CGATCGCGTT
AGTCATTTCT CTTTAGCTTG GATGGATCCC CAAGGGGAAC GTCAGCGCCA ACGCTGTCGT
CTCTAA
 
Protein sequence
MPKSGPMPAS LRRWLSGIAA IACLPLQSPA VNAQIAPAPS TGYNCDLALY SVPQANLLAR 
SLQGDTVADQ QYRQLVRELA MELRNCRQQV WPRKMAIWVR LYSCDLRPGG LDSLFDGLQA
LGYNEVFIET FYDGRVLLPA ADNPTVWPSV VAEPGLERVD LLAEAIRKGR ERGMSVYAWL
FTLNYGYSYS QRSDRQDTLA RNGRSESSLE IVSGGAQVFV DPFNPVARQD YQTLLRSVLS
RRPDGVLFDY VRYPRGTGAA SVMTKVADLL IHTTAARQAW INQLNTPAGQ ALLTEYLDTG
RLSPSDRNQL VLLLGDRLKE LNLRQDVDPL WSLAVYHAWR GVVEFVDEAV GTVAQAGLPS
GAVFFPFGNA RVGQQGWDSR MQPWDRFPNS MEYHPMSYAL CGDRHDCVMA EVQRVLEAKP
NSIVQPAIAG TWGANFNAHL PLEQRMAALR STFGDRIDRV SHFSLAWMDP QGERQRQRCR
L