Gene Synpcc7942_2341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2341 
Symbol 
ID3774624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2409252 
End bp2410133 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content58% 
IMG OID637800789 
Productcobalt transport system permease protein 
Protein accessionYP_401358 
Protein GI81301150 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.112211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTAC TGCGATCGCT GCCGTTGGGG TTATATCTCG AGCAGCCGGT GACTTGGCTG 
CATCGCCTCG ATCCCCGAGT GAAGTTGGGT TGGCTGATGC TGTTTTTGCT CAGCCCAATT
TTGGCGAGTC CTCTCTGGCG GATTGGCTTG GTAGTGGCAC TGTTGCTGCT GACTTTCAGC
GCTCGTATTC CTCTGCGCGT TTGGCGGCAG CAAATGGGCT GGCTCTTGAT ACTGGCGGGT
CTGCTATTTG CCCTGACAGC CGTGCTGCCT GATGGCCAGC TCCTGACTCA GCAGTCCTAT
CGACCTGAAT CCGGTCTGAC GCTACCGCCA GCGAGTGATT ACCGCTTCGA CCTCTGGAGC
TGGGGCAATC TACGGGTCAC GCAGCGATCA CTCAGCCTTG CAATCCGCAC CAGCACCCTG
ATTTTCACGC TGCTCTACGG CACCACGCTC TACCTACTGA CAACGACACC GGAAGAGATC
ACTGCTGCGA TCGAGGATTA TCTAGCTCCG CTGCGACGCT GGGGTCTCCC CATCACTGAA
ATTTCGCTGG CGCTGACCCT CGGGCTTCGC TTCTTGCCAT TGGTGCTCGA AGAGATCCAA
AGTCTCTATC GATCGGTCAC GACTCGCGCA ATCGATTGGA AGCAATTGGG GTGGCGGCGC
GGATTACAGA TCTGGCTTTT GGTCGCTGAG CGGGTTTTGC AAAATCTCTT GCTACGGGCG
GAGCAAATTG CGGCCAGCAT GCAGGTGCGC GGATTCACAA CTCCGAGTCG CCACCGTGTT
CCTTGGCACG ATCTGCAACT GCAGCGCCGC GATCGCTGGG CCATTACGAT CGGAGTGGCA
GCTCTCGGGG TGCGCTGTCT CTGGGGGCAA GGCAGCTTCT AG
 
Protein sequence
MDLLRSLPLG LYLEQPVTWL HRLDPRVKLG WLMLFLLSPI LASPLWRIGL VVALLLLTFS 
ARIPLRVWRQ QMGWLLILAG LLFALTAVLP DGQLLTQQSY RPESGLTLPP ASDYRFDLWS
WGNLRVTQRS LSLAIRTSTL IFTLLYGTTL YLLTTTPEEI TAAIEDYLAP LRRWGLPITE
ISLALTLGLR FLPLVLEEIQ SLYRSVTTRA IDWKQLGWRR GLQIWLLVAE RVLQNLLLRA
EQIAASMQVR GFTTPSRHRV PWHDLQLQRR DRWAITIGVA ALGVRCLWGQ GSF