Gene Synpcc7942_2332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2332 
Symbol 
ID3774615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2399369 
End bp2399851 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content54% 
IMG OID637800780 
Productcytochrome b6-f complex subunit IV 
Protein accessionYP_401349 
Protein GI81301141 
COG category[C] Energy production and conversion 
COG ID[COG1290] Cytochrome b subunit of the bc complex 
TIGRFAM ID[TIGR01156] cytochrome b6/f complex subunit IV 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.521824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCT TGAAGAAGCC GGATCTTAGC GATCCGATTC TGCGCCAAAA GCTGGCCAAA 
GGTATGGGCC ATAACTACTA TGGCGAGCCC GCTTGGCCCA ACGATTTGCT CTACATGTTC
CCAGTGGTGA TTCTGGGAAC GATCGCCTGC CTGACCGGCT TGGCAGTTCT GGATCCAGCT
TTGGTGGGTG AACCGGCTGA TCCCTTCGCG ACCCCGCTGG AAATTCTGCC GGAGTGGTAC
CTCTACCCCG TCTTCCAGAT CCTGCGGATC GTCCCGAATA AGCTGCTGGG CATCGTCCTG
CAGTCCATGA TTCCTTTGGG CTTGATTGCA ATTCCGTTCA TCGAAAGCGT CAACAAGTTC
CAAAATCCTT TCCGTCGCCC GATCGCAACG GCTGTCTTCC TGTTTGGTAC GGTCTTTACC
CTCTACCTCG GAATTGGTGC AGCGTTACCG ATCGATAAGT CGCTGACCCT CGGCTTGTTC
TAA
 
Protein sequence
MSILKKPDLS DPILRQKLAK GMGHNYYGEP AWPNDLLYMF PVVILGTIAC LTGLAVLDPA 
LVGEPADPFA TPLEILPEWY LYPVFQILRI VPNKLLGIVL QSMIPLGLIA IPFIESVNKF
QNPFRRPIAT AVFLFGTVFT LYLGIGAALP IDKSLTLGLF