Gene Synpcc7942_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2298 
SymbolruvA 
ID3774581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2368966 
End bp2369589 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content58% 
IMG OID637800746 
ProductHolliday junction DNA helicase RuvA 
Protein accessionYP_401315 
Protein GI81301107 
COG category[L] Replication, recombination and repair 
COG ID[COG0632] Holliday junction resolvasome, DNA-binding subunit 
TIGRFAM ID[TIGR00084] Holliday junction DNA helicase, RuvA subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGCT ATCTCCAAGG TTCTCTGGCT GGCGTTCGCA AGCAGAGCGG CCGACTCTTG 
CTCTTATTAG ATGTGCAGGG AGTTGGCTAC GAAGTGCAAA CACCAGCGCG ATCGCTGGTA
GAGCTGCCTG CCGCTGGTCA ATCCCTACAA GTGTTCACCC ATCTTCAGGT CCGAGAAGAT
CAGTGGCTGC TGTTTGGTTT CTTGCAAATG GCAGAGCGCG ATCTGTTTCG GCAGCTGATC
AGCGTCAGCG GGATTGGCCC CCAGTTGGGG CTAGCGCTGC TCGACAGTTT AAGTCTGGCG
GAATTAGTGC AGGCGATCGT GGCGGGCAAT ACGCGTCTGC TGAGCCGGAC TCCCGGCGTT
GGTGCGAAGA CCGCAGAACG ACTCGCCTTG GAGTTGCGTA GCAAATTAGC GGAGTGGCGC
GAAGAGGCGG GCCTGCTCCC CAGTGCGACG GCAGCCCCGA TCGCAGCAGT ACAGGAGGAT
GTGGAAATGA CCCTGCTGGC GCTGGGATAC AACAATCGCG AAATCCTGCA AGCCTTGACC
GCGATCGCCC AAGAAAATCT TGTCCAGTCG GGGCAGCCCG CCGAAGATTG GATTCGTGAA
GCGATCGCAT GGCTTAGCCG TTGA
 
Protein sequence
MIGYLQGSLA GVRKQSGRLL LLLDVQGVGY EVQTPARSLV ELPAAGQSLQ VFTHLQVRED 
QWLLFGFLQM AERDLFRQLI SVSGIGPQLG LALLDSLSLA ELVQAIVAGN TRLLSRTPGV
GAKTAERLAL ELRSKLAEWR EEAGLLPSAT AAPIAAVQED VEMTLLALGY NNREILQALT
AIAQENLVQS GQPAEDWIRE AIAWLSR