Gene Synpcc7942_2278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2278 
Symbol 
ID3774560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2345093 
End bp2347240 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content50% 
IMG OID637800725 
Producthypothetical protein 
Protein accessionYP_401295 
Protein GI81301087 
COG category[R] General function prediction only 
COG ID[COG4639] Predicted kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTG TGCTGAGTGC CCCCGACTTA CCTTGGAACC ATCTCTTGAT TGGCCCACCC 
GCCAGTGGCA AAACCACGTT TGCCAGAGCA TTGCAACAGG AACTAGGGGC AGCGGTCATC
ATCTCTACTG ATGGCATTCG TGAACGACTG TATGGAGATG CAGCCGTTCA AGGACCTTGG
GCTGAAATAG AAGCAGAACT TCAGCGCCAA ATTCAGGAAG CGGTGCTCGC TCAGAAAGCA
ATTATCTACG ACGCGACCAA CGTCAAACGC GCTTGGCGCA TGGGCTTCTT GCAGAAATTA
CAAGTTCATG GTTTGAGCTG GATTGGCTGG GAGCTGAAGA CTGACTTAAA GACCTGCAAA
GCTTGGAATC AACAGCGATC GCGGCAAGTG CCTGAAGCTG TGATCGAGAA CTTTCATGCC
TATCAGCGAC AGCTCAAACC AATGCAGGGC GAGGGCTTTG TGGGGATTGC CAGCATTGAT
CCGGTCAAAA ACCCCAATCT ATCCAACACC ATTCAAGAAC AACTTAAGAA GTGTCGACGC
AGTGCGGTTA ACCACGAAAA TCGCTACGGA AAAATCGAAC GACATCGTTA CTCTCGCTTG
CGTGATTTTG ACAGACTACT GCACTTGATT GCACTGTTAA GCTGCTATCC TGGCATCGGC
AGTCTGCAAG AGCAACAGCC TGAATTATTG CAACAACTAT TAAAGACGCA AGAGCAACCT
AACTTTCAAG ATTCTATTGC AGAAATTGCA GCCATTTTAG GGGCTCAGCA TGGTGAAATC
TATTGCGATT CAGAAGCGAT CGCAGCAGAT CTAGACTGGT TAGAATCTGA GGGTTTTCTG
GGCAGTGATG TCAGCTTTCA TGAATTAACA CAGCCCTCTT TCATTGACTC TGGCGAACCC
CTATTTTTTC ATCACTACAG CGATTGGGAT ACCTTTAAGC GACTGTTCAA AACAATCCGC
TATATCATCC AGAACCCACT GACCCAAGAG GAACATCACC TTCAAGACAA GTTGCTCAAT
CCCCAGCGGA GACGGATAGA CATCTTGGCC GATCAATTAA TTGGCGCTCG TATTTTAGTT
AGTTCTACGG AGCAAGGCAT GCTCCGCAAA GACATTGAAT GGGTTTTACA CCCCTATCGA
ATCTTCCCGG AGGCTACCAT GCGCAGAGGC TACTACTTAG GAACTGGAAT TCTCAACCGT
GATGACCTTC TGCAAATCTA CCAGTTGGTC GATAAACAAG TTCTGAGTTT AGATAACCCC
ATCGAAACTC GTGCGGTCAA TCGTCTTCGT CAAGGCTTGG AGTGGGCTCG CTTTGACCTC
AAGAATCTCT ACCCAGTGCG ATCGATTGCT GGCGGTAATA TCGTTAACTC GGACCTGCTA
AGCAATCAAT CCTTAGCCAC TGCGGACGAG AGCCAGAAAC TAGAGCAAGC AATCCGCTCT
GGCCAAGCAA TTCGTGTGGG ACGCTTTAAA GGCGCTGGAC AATATCAAGA ACAACCCGAC
TCGGAAAAGA TTATTTGGCC TTTGCAAATA GTCTTCCACA ATATTGCCTG GTATCTCGGC
TATGAACTGG CTGAAGGGGA CCAGAAAGGA CTGTATTGCT ACGAACGGCT CGATCGCCTG
TATCAGAGCG GTCCTGTTGG CAAGCCCCGC AGTCACGCCG AGCAAAAGCG ATCGCTCGAT
TCCCTTGAAC TGCTGCGCAG CCAAAGCTAT GGGTTGTATC TCGGCGGGGC CGTTGCACCC
CAACAAGCCC TCCTGCAAAT TAAGACCTTG GCCGCCCGGC TCAAGCTGAT GCAGGTACTC
GAATTACGCT TTAGCGAGCG CTTATTTCGC TTCGTCAGTG AAGGCACACA GCGCTTTCCC
GATGGACAAG TCAAAATGAC GCTGCCGCCC GATCGGCATC TCCTCACCGC ACTGCCGGGC
CTCAAGAAAA TCTACAGCCT GCCCAAAGCA GCCGATCCGA CCCATCCCTA TCAAATGAAA
GTCTGGCTCC CTGCTTGGTC GATTCAAGAG GTCACCCTCA AAAACTGGAT TATGGGCATG
GGGGGTGAAG TTAAGGTCCT CGGCCCGACA GAGCTGTGCG ATCGCATCAT CGAAAATCAT
CGGGCAGCCG CTGCTCTCTA CGCCGATGCT AGTACGAGTA AGGGTTGA
 
Protein sequence
MLIVLSAPDL PWNHLLIGPP ASGKTTFARA LQQELGAAVI ISTDGIRERL YGDAAVQGPW 
AEIEAELQRQ IQEAVLAQKA IIYDATNVKR AWRMGFLQKL QVHGLSWIGW ELKTDLKTCK
AWNQQRSRQV PEAVIENFHA YQRQLKPMQG EGFVGIASID PVKNPNLSNT IQEQLKKCRR
SAVNHENRYG KIERHRYSRL RDFDRLLHLI ALLSCYPGIG SLQEQQPELL QQLLKTQEQP
NFQDSIAEIA AILGAQHGEI YCDSEAIAAD LDWLESEGFL GSDVSFHELT QPSFIDSGEP
LFFHHYSDWD TFKRLFKTIR YIIQNPLTQE EHHLQDKLLN PQRRRIDILA DQLIGARILV
SSTEQGMLRK DIEWVLHPYR IFPEATMRRG YYLGTGILNR DDLLQIYQLV DKQVLSLDNP
IETRAVNRLR QGLEWARFDL KNLYPVRSIA GGNIVNSDLL SNQSLATADE SQKLEQAIRS
GQAIRVGRFK GAGQYQEQPD SEKIIWPLQI VFHNIAWYLG YELAEGDQKG LYCYERLDRL
YQSGPVGKPR SHAEQKRSLD SLELLRSQSY GLYLGGAVAP QQALLQIKTL AARLKLMQVL
ELRFSERLFR FVSEGTQRFP DGQVKMTLPP DRHLLTALPG LKKIYSLPKA ADPTHPYQMK
VWLPAWSIQE VTLKNWIMGM GGEVKVLGPT ELCDRIIENH RAAAALYADA STSKG