Gene Synpcc7942_2269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2269 
Symbol 
ID3774551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2337207 
End bp2337944 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content62% 
IMG OID637800716 
Producthypothetical protein 
Protein accessionYP_401286 
Protein GI81301078 
COG category[S] Function unknown 
COG ID[COG4241] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAG AACCGGCGAA GGGGCCGCAA GCAGAGGATT GGGATGATTG GGTCGATGCG 
GATCCAGAGT CGGCAACAGC GCTGACGCCC GCCGCGATCG CAGCCCGCAC AGAACCTCAA
GGTCCTCTGG CGCTGGTGGA AACCGCGTTT ATGGCCAGCG CCGCCGCACT ACTGTGGTTG
GTCAATTACT TCTTCCCGCT CGGCCCTGTC CTGCGAGTCC TGTTCCCGTT ACCGATCGCC
TTGCTCTACC GCCGCTGGGG TCTACGCAGC GCTTGGTTAG GCGCGATCGT CGCCAGTCTG
TTGCTGTTTG TTTTGCTTGG CCCGACGCGC GGCATTCTCT TCTTGTTGCC GCCGGGCTGT
CTGGGGGTCC TCTTGGGTTG CTGTTGGCAA CGGCGGCTCT CTTGGGGTTG GTCGATTCTG
CTGGGCGGTG GCCTCGAGAC GATCGGTTTC TTCTTCCGCC TGTGGGTGCT GTCCGTGCTG
TTGGGCGAAG ACATCTGGAC CTATGTGACC GCCCAAGCCA CCGGCTTTCT AGAGTGGCTG
ACGGGGGTGC TGGGTTGGTT AGTCCAGATA CCGCTCTCGA CGGTGCAAGC AGTCGCCTTT
GCGATGATCA CCCTCAGCAG TTTGCTCTAC ATTCTGGTGG TGCATGGGGT GGCTTGGGTG
CTGTTCCGCC GCTTGGGAAC GCCCATCCCC GCGCCGCCCC ATTGGCTCCA GACGGTTCTC
GATCTCGATG CGGACTGA
 
Protein sequence
MTAEPAKGPQ AEDWDDWVDA DPESATALTP AAIAARTEPQ GPLALVETAF MASAAALLWL 
VNYFFPLGPV LRVLFPLPIA LLYRRWGLRS AWLGAIVASL LLFVLLGPTR GILFLLPPGC
LGVLLGCCWQ RRLSWGWSIL LGGGLETIGF FFRLWVLSVL LGEDIWTYVT AQATGFLEWL
TGVLGWLVQI PLSTVQAVAF AMITLSSLLY ILVVHGVAWV LFRRLGTPIP APPHWLQTVL
DLDAD