| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2258 |
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| Symbol | avtA |
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| ID | 3773914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2327013 |
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| End bp | 2328296 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800705 |
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| Product | valine--pyruvate transaminase |
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| Protein accession | YP_401275 |
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| Protein GI | 81301067 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3977] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.782201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.105483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTAG AATCGCTCAG CCGCTACGGG CGGCAGATGT CTCAGCTCAC GGGCGTACGC
GCCATCATGA AGGACATCAT TGAGACCTTG CGATCGGGGC AAGGCCAAAC TTTTATCAAT
CTCAGTGCTG GAAATCCCGT CGTTCTGCCT GAGGTGGAGC AGCTCTGGCG CGACTGTACC
GCCGATTTAC TCGGCAGTGC TGAATACGGT CAGGTGGTGG GTCGCTACGG CACCAGTCAA
GGCTATGAAC CGCTGATCGC CGCCATCATT CAAGAGTTCA ATCAGCGCTA CGGCTGGTCG
ATTAGCGATC GCAATATTTT GATTACGCCC GGTAGCCAGT CTCTCTACTT CTTGGCGGCC
AATGCCTTTG GTGGCTGGGC AGAAGATGGC AGCCTTCGCA AAATTCTCTT GCCCCTTAGC
CCCGACTATA CCGGCTACGG TGGCGTCTGT CTGGAACCGC AGGCGGTGGT TGCGGCTCGA
CCACAGATTG AACGAATTGG CGATCATCGC TTCAAATACC GTCCTGACTT TGAACAGTTG
CAAATTGGCG CCGATACCGG GATGCTGCTG TTTTCGCGGC CCTGCAATCC CACCGGCAAC
GTCATCAGTG ACGCCGAACT AGAGCGTCTG GCGACCCTTG CGGCAGCCCA GAACGTGCCG
GTGTTTGTCG ACTCTGCCTA CGCCCCCCCC TTTCCTGGGC TCAACTTTAC GGAGATGACC
CCCTTCTTTG GGGACAACAT TGTTCACTGC CTCAGCCTCT CGAAGGCGGG TCTGCCTGGT
GAACGCCTCG GCATCGCCAT TGGTCCAGAG CCGGTGATTC AAGTCTTGGA AGCCTTCCAG
ACCAATCTTT GCATTCACTC CTCACGCTAT GGCCAAGCAA TCGCAGCCCG GGCGATCGCC
TCAGGCCAGT TGACGGCGAT CGCAGAAACC GTGATTCGCC CCTACTACGC CGCAAAATTT
GCCCGAGTCG AACGTCAGCT CGATGCCCTC TTGCCGGATT CTTTACCCTG GCGCTTGCAC
CAAGGAGAAG GTGGCATTTT TGCTTGGCTC TGGTTAGAAG AAGCCCCCCT AGATGATTGG
CAAATCTATC AGCAGCTCAA ACAAGCGGGC GTAATTGTCG TGCCAGGGAG TTCTTTCTTC
CCGGGGCTGC GGGAGGATTG GGTCCATACG CGCCAATGTC TGCGGATCAG CTTGGCAGCT
GAAGATCACG AATTGGAGAC CGGCATGGAA CGCCTCGCCA CCACTGTGCA GCAGATCTAT
CGTCAAGCGC CCATTCCCGC CTAA
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| Protein sequence | MSLESLSRYG RQMSQLTGVR AIMKDIIETL RSGQGQTFIN LSAGNPVVLP EVEQLWRDCT
ADLLGSAEYG QVVGRYGTSQ GYEPLIAAII QEFNQRYGWS ISDRNILITP GSQSLYFLAA
NAFGGWAEDG SLRKILLPLS PDYTGYGGVC LEPQAVVAAR PQIERIGDHR FKYRPDFEQL
QIGADTGMLL FSRPCNPTGN VISDAELERL ATLAAAQNVP VFVDSAYAPP FPGLNFTEMT
PFFGDNIVHC LSLSKAGLPG ERLGIAIGPE PVIQVLEAFQ TNLCIHSSRY GQAIAARAIA
SGQLTAIAET VIRPYYAAKF ARVERQLDAL LPDSLPWRLH QGEGGIFAWL WLEEAPLDDW
QIYQQLKQAG VIVVPGSSFF PGLREDWVHT RQCLRISLAA EDHELETGME RLATTVQQIY
RQAPIPA
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