Gene Synpcc7942_2256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2256 
Symbol 
ID3773912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2326061 
End bp2326615 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content54% 
IMG OID637800703 
Producthypothetical protein 
Protein accessionYP_401273 
Protein GI81301065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.043816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0878131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTGT TCACTTTCCT ATCCCCCAAG CTCAGGGACT TCCGTCAATA TCTGCGTATC 
TGGGCCTGGT TTTTCTTGAG TCTTTCCCTT AGTTTTGGCT CGGCGAAAAC GGCGATTGCA
GCGGAGCGGG TAACCCTGTT GGCTGGTTCC TGGGCGCGAT CGGTCGAGCT AGATGATCTG
CGATCGCTCG CAGTTACTGG ACAAGCCTCG GGGTTTTTGC AAGATGCTCT CCGCTATGGC
AACCTCCAGC CCAAGACTGT GCAAGCGGCG CTTAATTTCT CAATTCCGCT CTCACCAGTG
CTTGCCGATC GCTTACTCTA TTCGCCCCTT GGTAATCTGG CTTTAGATCG CATCGGCCGA
ATTCTGTCCC CTCGAGTGTC GGGCCAAGAT GGCCGCCAAG CCTTGCGGGG AGCAATTTTA
CAGTCAGTAG CCCGCGATAG TCGTTTCACG TTGCTCGAGT TGCTGGATAA CTATCCGACC
GATGCGCGCC TCGATTTACT GCAAATTCAA CAGTTGCAGC AGGATTTAGC ACTGCTCAGT
CGGCTCTCAT TCTGA
 
Protein sequence
MPLFTFLSPK LRDFRQYLRI WAWFFLSLSL SFGSAKTAIA AERVTLLAGS WARSVELDDL 
RSLAVTGQAS GFLQDALRYG NLQPKTVQAA LNFSIPLSPV LADRLLYSPL GNLALDRIGR
ILSPRVSGQD GRQALRGAIL QSVARDSRFT LLELLDNYPT DARLDLLQIQ QLQQDLALLS
RLSF