Gene Synpcc7942_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2239 
Symbol 
ID3773895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2305276 
End bp2305791 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content55% 
IMG OID637800686 
Producthypothetical protein 
Protein accessionYP_401256 
Protein GI81301048 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0136177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCTG TCGCTATGCC TCGGCGTTTT TCTCTGTTGT TGTTTGCGAT CGCTTGTACG 
GTCTGCTTAC TGCTCGGCAG TGGCCTAGAG CGTTTGCAAG CCGCGACCTA TGTCCCTGTC
GATACAGTTG ACCCAATCCA ACCGCGCTAT GCCTTGGGAC AGCAAGCCTA TCGAGAAAGC
TGTGGCAGTT GCCATGTGGC GTTGCCGCCG GAAGTCTTGC CAATCCAAAC CTGGCAAATT
TTGCTGAACG ACACGCAGCA TTACGGCACG ATATTACCTG CCATCGATGT GCCGACTCAG
CGACTGATCG GGAATTACCT ACGGGCTTAC ACGCGATCGC TCGCGGTCGG TGAAACAGTC
CCCTACCGTC TCCGCAATTC AGTGCTGTTC CGATCGCTTC ACCCCCAGGT GAATGTGCCG
AGTACAGGAC AAATCAATAG TTGCATCAGC TGCCATCCGG CCGCATCTCA ATTTTCCTAT
CGGCAACTCT CTCCCGAGTG GCAAAGCAGC CGCTGA
 
Protein sequence
MIAVAMPRRF SLLLFAIACT VCLLLGSGLE RLQAATYVPV DTVDPIQPRY ALGQQAYRES 
CGSCHVALPP EVLPIQTWQI LLNDTQHYGT ILPAIDVPTQ RLIGNYLRAY TRSLAVGETV
PYRLRNSVLF RSLHPQVNVP STGQINSCIS CHPAASQFSY RQLSPEWQSS R