| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2214 |
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| Symbol | secY |
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| ID | 3773773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2289522 |
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| End bp | 2290841 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637800661 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_401231 |
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| Protein GI | 81301023 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.180024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGTCA GTCGCGGGAA GACCCCAAAC GCCCAAGAAA CTTTTTTACA GATGGCCCAA
GCCTCGGGAC TGAGGGGGCG CATTCTGATC ACGGTCGGCC TGTTAATCCT GTGTCGACTG
GGCATTTTTA TTCCGGTTCC CGGCATTGAT CGAGTTGCCT TTAGCAACGA TCTGCAGGGC
AATGCAAATC TCGGCGGCGT GATTGGCTTT CTCGATATTT TTTCGGGGGG TGGTCTGTCC
GCTTTGGGCG TTTTTGCCCT TGGGATTTTG CCCTACATTA ATGCCTCGAT CATTTTGCAG
TTGCTAACTG CCGCTGTGCC GGCTCTCGAA GACCTGCAAA AAAATGAAGG TGAGGCAGGC
CGCCGCAAGA TCGCGCAGTT AACCCGCTAC GTCTCCCTCG GCTGGGCCTT GCTCCAGAGT
ATTGTTATCG CCGTATGGGT GACCCGCTAC GCCGTCACAC CCGGACCCCT GTTCACCATT
CAGACGGCTT TGGCCTTGGT GGCCGGCTCC ATGTTTGTGA TGTGGATCAG TGAGTTGATC
ACTGAGCGTG GCATTGGCAA TGGGGCATCA CTGCTGATCT TTCTCAACAT TGTTGCGACC
TTGCCGCGAT CGCTGCAGCA GACCTTAGAG CTCGCCCAGA GCGGTGATCG CAGCACTGTG
GGTGGGATTG TCATCCTGCT GATCGTCTTC TTGGCCACGA TTGTTGGCAT CGTCTTCGTC
CAAGAGGGGA CGCGGCGGAT TCCGGTCGTC TCGGCTCGTC GGCAAGTTGG GAATCGCGTC
TACAGCGAGC GCAGTAGCTA TCTGCCGCTG CGCCTCAACC AAGGTGGTGT GATGCCGATC
ATCTTTGCCT CGGCGATTTT GGTGCTGCCC TTCTCCTTGG CTAACTTCAC CAGTAACGAA
GTTGTGCTGC GGATTGCTAA CTACCTCAGC CCCAATGGTC CGACCCCTTG GATTTACGCC
CTTTTCTACC TTGTGTTGAT TGTGGCGTTT AGCTATTTCT ACTCCTCCTT GATCCTCAAC
CCCGTCGACT TGGCTCAGAA CCTCAAAAAA ATGGGGTCGA GTATTCCTGG AGTGCGTCCT
GGTCGAGCAA CCAGCCAATA CGTACAGGGA GTGCTCAACC GTCTGACAAT CCTGGGGGCA
GTGTTCCTGG GTTTGGTGGC CATCATCCCC ACGGCTGTTG AAGGTGCGAC TCGGATTCGG
ACTTTCCAAG GCTTTGGGGC AACCTCGCTG CTGATCCTGG TGGGTGTCGC GATCGATACC
GCCAAGCAGG TGCAAACCTA CGTGATCTCG CAGCGCTATG AAGGAATGGT GAAAGACTAG
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| Protein sequence | MVVSRGKTPN AQETFLQMAQ ASGLRGRILI TVGLLILCRL GIFIPVPGID RVAFSNDLQG
NANLGGVIGF LDIFSGGGLS ALGVFALGIL PYINASIILQ LLTAAVPALE DLQKNEGEAG
RRKIAQLTRY VSLGWALLQS IVIAVWVTRY AVTPGPLFTI QTALALVAGS MFVMWISELI
TERGIGNGAS LLIFLNIVAT LPRSLQQTLE LAQSGDRSTV GGIVILLIVF LATIVGIVFV
QEGTRRIPVV SARRQVGNRV YSERSSYLPL RLNQGGVMPI IFASAILVLP FSLANFTSNE
VVLRIANYLS PNGPTPWIYA LFYLVLIVAF SYFYSSLILN PVDLAQNLKK MGSSIPGVRP
GRATSQYVQG VLNRLTILGA VFLGLVAIIP TAVEGATRIR TFQGFGATSL LILVGVAIDT
AKQVQTYVIS QRYEGMVKD
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