Gene Synpcc7942_2208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2208 
SymbolrplQ 
ID3773766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2286420 
End bp2286770 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content57% 
IMG OID637800654 
Product50S ribosomal protein L17 
Protein accessionYP_401225 
Protein GI81301017 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0203] Ribosomal protein L17 
TIGRFAM ID[TIGR00059] ribosomal protein L17 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCATC GTTGTAATGT TCCACAGCTG GGTCGCCCAG CTGACCAGCG CAAGGCTCTG 
TTGCGCTCTC TGACCACCGA AATTATTCGG AATGGTACGG TTACGACCAC CAAAGCTCGT
GCCAAAGCCG TGCGTTCTGA AGTGGAGCGG ATGGTGACCC TCGCCAAAGA TGGCAGCCTA
GCCGCTCGGC GTCAGGCCTT GGGTTACATC TACGACAAAC AGCTGGTTCA CTTGCTGTTT
GAGCAGGCTC CCGAGCGCTA CGCAAAACGT CAAGGTGGCT ACACCCGCAT CTTGCGGACT
GTCCGCCGCC GTGGCGACAA TGCAGAAATG GCCATCATTG AGTTGACTTA G
 
Protein sequence
MRHRCNVPQL GRPADQRKAL LRSLTTEIIR NGTVTTTKAR AKAVRSEVER MVTLAKDGSL 
AARRQALGYI YDKQLVHLLF EQAPERYAKR QGGYTRILRT VRRRGDNAEM AIIELT