Gene Synpcc7942_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2196 
Symbol 
ID3773753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2274904 
End bp2275545 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content56% 
IMG OID637800641 
Producthypothetical protein 
Protein accessionYP_401213 
Protein GI81301005 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.596477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGGG CGATCGCAGT GGCGAGTTTG GTGCTCACAG CTTGCGCGCC CACGCAGCAG 
CTTCAGGCAG AAATTCAAGA AGTCGCGACC TCACCCGTCT TTGCCAGCCA ACCCAATCAA
GCAGAACAAC CGGCCTCTGA GGGGACAGTT GTTATTCAAG GCGGACAAAT TCGTACCGAG
AGTCCCGGTA AAGCCCAAAT TCAACTGAGT GATGGTCTGC AGTTTCGACT GGGTGGCAAC
GCCTTGTTGA AAATTGAGCC TGAACTCCAG CTCGATCGCG GTCAGATTAT TGCTTGGCTG
ACGCCGAATC AAAAGCGCGA TCGCCCCTTG CAAATCCGCA CGCCAACTGC CACAGCCGCT
ATTCGCGGCA CAACGGTCTT TATTGAGCAA ACAGAGACCC AAACTCTGAT CTTGAGCTGG
GAAGGACAAG TGGAGGTGCA GCTACCTTCT GGTGTGACCA CACAGCTGAC AAGTGGTCAA
TTGGTTCGCC TTCGGCCCGG CCAAACGACC TTGCCGACGC CAGAGCGTTT GAGTCGTCCC
GCAGCTGAGC AACGCTTCCA ACGAAGCCTG CTGCTGAATG GTTTCGCCAC GCCGATGGAA
ACGCTGCCCG AAATTCGCCG CCAACTATTG GGACTGTCTT AG
 
Protein sequence
MWRAIAVASL VLTACAPTQQ LQAEIQEVAT SPVFASQPNQ AEQPASEGTV VIQGGQIRTE 
SPGKAQIQLS DGLQFRLGGN ALLKIEPELQ LDRGQIIAWL TPNQKRDRPL QIRTPTATAA
IRGTTVFIEQ TETQTLILSW EGQVEVQLPS GVTTQLTSGQ LVRLRPGQTT LPTPERLSRP
AAEQRFQRSL LLNGFATPME TLPEIRRQLL GLS