Gene Synpcc7942_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2171 
Symbol 
ID3773728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2252196 
End bp2252726 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content51% 
IMG OID637800616 
Productstarvation induced DNA binding protein 
Protein accessionYP_401188 
Protein GI81300980 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.77873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATA CAGGTTTGGT CCAATCCTTT AGCCAAATTG AGCCCAATGT CTTGGGCTTG 
GAAACATCGG TTACGAGTCA GATTTGTGAA GGTCTGAACC GGGCCTTGGC CAGCTTTCAA
GTTCTCTATT TGCAGTACCA AAAGCACCAC TTCACGGTTC AAGGGGCTGA ATTCTACTCG
CTCCATGAGT TTTTTGAAGA TAGCTATGGT TCGGTGAAGG ATCATGTCCA CGACTTGGGT
GAGCGCTTGA ATGGCTTGGG GGGTGTTCCG GTTGCCCACC CGCTCAAGTT GGCTGAGCTG
ACCTGTTTCG CGATTGAAGA AGACGGTGTC TTTAACTGTC GGACGATGCT CGAACACGAT
CTGGCGGCTG AGCAGGCCAT CTTGTCCTTG CTGCGGCGCT TGACTGCCCA AGTTGAAAGT
CTGGGCGATC GCGCAACTCG CTATCTGTTG GAAGGAATTT TGCTGAAGAC CGAAGAACGG
GCTTATCACA TTGCTCACTT CTTGGCTCCC GACAGCCTCA AGCTTGCCTA A
 
Protein sequence
MTNTGLVQSF SQIEPNVLGL ETSVTSQICE GLNRALASFQ VLYLQYQKHH FTVQGAEFYS 
LHEFFEDSYG SVKDHVHDLG ERLNGLGGVP VAHPLKLAEL TCFAIEEDGV FNCRTMLEHD
LAAEQAILSL LRRLTAQVES LGDRATRYLL EGILLKTEER AYHIAHFLAP DSLKLA