Gene Synpcc7942_2156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2156 
Symbol 
ID3773713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2239305 
End bp2240726 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content57% 
IMG OID637800601 
ProductL-glutamine synthetase 
Protein accessionYP_401173 
Protein GI81300965 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0673307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGA CCGCTCAAGA GGTCCTTCAG CTTATTCAAG AGAAGGGTAT CCAGCTTGTC 
GATTTGAAAT TTATCGACAT GCCGGGGATT TGGCAGCACT TGACACTACA CGTCAGCCAA
ATCGACGAAA ACAGCTTTGT TGAGGGCGTT CCCTTCGACG GTTCCAGCAT CCGGGGCTGG
AAAGCGATCA ACGAGTCGGA CATGACGATG GTGCCCGATC CAACCACTGC TTGGATCGAC
CCATTCATGA AAGAGCCGAC GCTCAGCATG ATCTGTACGA TCTACGAGCC GCGCACTAAC
ACCCCCTACG AGCGCTGCCC CCGGGCGATC GCTCAAAAAG CGGTGGATTA CCTCAAAGCT
AGCGGGATCG GTGACACGGC TTACTTCGGC CCCGAAGCAG AATTCTTCAT CTTTGATGAC
GTTCGCTTCG ATCAGGCTGA GAACAAGAGC TACTACTACG TCGATTCGAT CGAAGGCCGC
TGGAACTCCG GCCGCGAAGA AGAAGGCGGT AACCTCGGCT ACAAGCCTCG CTACAAAGAG
GGCTACTTCC CAGTGGCCCC GACCGACACC AGCCAAGATA TGCGTAGCGA AATGCTGCTG
ACCATGGCTG ATTGTGGCGT GCCAATTGAG AAGCACCACC ACGAAGTGGC GACCGGCGGC
CAGTGTGAGC TAGGCTTCCG CTTCGGCAAG CTGATCGAAG CAGCGGACTG GCTGATGACC
TACAAGTACG TGATCAAAAA CGTGGGTCGT CGCTACGGCA AAACGATTAC CTTCATGCCC
AAACCGCTGT TCAACGACAA CGGTTCTGGT ATGCATACCC ACCAGTCGAT TTGGAATGAT
GGTCAGCCGC TGTTTGCGGG CGACCAGTAT GCTGGCCTGA GCCAAATGGC GCTCTGGTAC
ATCGGCGGTA TCCTCAAGCA CGCGCCGGCC TTGTTGGCTC TCACCAACCC CACCACCAAC
TCCTACAAGC GCCTTGTGCC TGGCTTTGAA GCGCCGGTCA ACTTGGCCTA CTCCCAAGGC
AACCGCTCGG CTTCGGTGCG GATTCCCCTT TCAGGCACCA ACCCGAAAGC GAAGCGCTTG
GAGTTCCGTT GTCCTGACGC GACCTCCAAC CCCTACTTGG CGTTTGCGGC GATGCTCTGC
GCTGGTATCG ACGGCATCAA GAACCAAATT GATCCGGGCG AACCGCTGGA TGTGGACATC
TACGACCTCA GCCCCGAAGA GCTGGCTAAA ATCCCCAGCA CCCCGGGTTC ACTCAAGGAT
GCGCTGAAAG CACTAGAGGC CGATCACGAC TTCCTGACTG TGGGCGGCGT CTTCACGGAA
GACTTCATCC AGAACTGGAT CGAGTACAAG CTCGACAACG AAGTGATTCC GATCAGCCTG
CGTCCGCACC CCTACGAATT CGCGCTCTAC TACGACTGCT AA
 
Protein sequence
MPETAQEVLQ LIQEKGIQLV DLKFIDMPGI WQHLTLHVSQ IDENSFVEGV PFDGSSIRGW 
KAINESDMTM VPDPTTAWID PFMKEPTLSM ICTIYEPRTN TPYERCPRAI AQKAVDYLKA
SGIGDTAYFG PEAEFFIFDD VRFDQAENKS YYYVDSIEGR WNSGREEEGG NLGYKPRYKE
GYFPVAPTDT SQDMRSEMLL TMADCGVPIE KHHHEVATGG QCELGFRFGK LIEAADWLMT
YKYVIKNVGR RYGKTITFMP KPLFNDNGSG MHTHQSIWND GQPLFAGDQY AGLSQMALWY
IGGILKHAPA LLALTNPTTN SYKRLVPGFE APVNLAYSQG NRSASVRIPL SGTNPKAKRL
EFRCPDATSN PYLAFAAMLC AGIDGIKNQI DPGEPLDVDI YDLSPEELAK IPSTPGSLKD
ALKALEADHD FLTVGGVFTE DFIQNWIEYK LDNEVIPISL RPHPYEFALY YDC