Gene Synpcc7942_2147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2147 
Symbol 
ID3773704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2230316 
End bp2230726 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content52% 
IMG OID637800592 
Producthypothetical protein 
Protein accessionYP_401164 
Protein GI81300956 
COG category[R] General function prediction only 
COG ID[COG2402] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.580506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.267896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGC TACTGGTGGA TACGGGACCA CTCATTGCTT GGTTTGATCG GAGCGACAAT 
TTTCACGATC GCTGCCGCTC CTTCTTCAGC AGCGTCGATC GCCCACTACT AACGACATGG
CCAGTCCTAA CTGAGGTCTG TCATTTGATT CCGTCCTATG GGGTCAATCG ATTTATGCGT
TGGGTCGCTT TGGGCGGTCT CGAAGTGCAA GAACTTGGAA CGACCGCAAT CACGGGAATT
GCCAATCTGA TGGAGCGTTA CAGCGATATC CCGATGGATT TGGCAGATGC TTCCTTGGTT
TGGGTAGCCG GACAGTGGGG CTTGAGTGAG ATCGTGACGC TCGATCGACG AGACTTTGGG
ATTTATCGAC TGCCAGGCGG TGAAGCGCTA ATCAACCAGC TATTTACTTG A
 
Protein sequence
MSKLLVDTGP LIAWFDRSDN FHDRCRSFFS SVDRPLLTTW PVLTEVCHLI PSYGVNRFMR 
WVALGGLEVQ ELGTTAITGI ANLMERYSDI PMDLADASLV WVAGQWGLSE IVTLDRRDFG
IYRLPGGEAL INQLFT