Gene Synpcc7942_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2120 
Symbol 
ID3774339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2201698 
End bp2202114 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content60% 
IMG OID637800565 
Productribonuclease III 
Protein accessionYP_401137 
Protein GI81300929 
COG category[S] Function unknown 
COG ID[COG1939] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.520758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCGTTC CCGAGTCAGA CCCCCTCCGC GGCGATCGCC GCCTCAGTCC TGCGGCAGCA 
AAGCAACTGT CGCCCCAGGC ACTAGCCTAC CTAGGAGATG CCCTCTACGA ATTCCATGTG
CGCCTGCGTT TGTTACTGCC GGCGCAGCGT TCCCATCAAT TTCACCAGTC TGTGGTTGCT
GCAGTGCGAG CCGAGCGCCA AGCGGAATTG TTGGTGAGTC TACTACCGCT GCTGACAGCG
GAAGAACTTG AGATTGTCCG TCGCGGTCGT AATGCGGCCG GACGTGTGCC ACGCCGCCTG
ACTGCAGAAT GCTATCAGCA GGCAACAGGG TTAGAGACCC TGCTGGGCTA TCTCTATCTG
TGTGATCCCC AGCGCTTGCA AGCGCTACTC CAGCAGCTGC CCGTCACCGA GTACTGA
 
Protein sequence
MFVPESDPLR GDRRLSPAAA KQLSPQALAY LGDALYEFHV RLRLLLPAQR SHQFHQSVVA 
AVRAERQAEL LVSLLPLLTA EELEIVRRGR NAAGRVPRRL TAECYQQATG LETLLGYLYL
CDPQRLQALL QQLPVTEY