Gene Synpcc7942_2112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2112 
Symbol 
ID3774331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2192960 
End bp2193502 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content57% 
IMG OID637800557 
Producthypothetical protein 
Protein accessionYP_401129 
Protein GI81300921 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.229399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.697111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGC TGATCAGCAG TACTTCTTCC GGCGCTGGTA AATCCGCGAT CGCCCAAGCA 
CTACAGGCCT ATCAAGCTTG GCGACGGCAA CCGGTTTGGT CGCTTCAAGA CTGGCTGGCG
TCAGATCAGT CCTTGGCGGA ACGCTGGCAG ACTTTGCAGC AGAGCGAAGC CTGTTTTCTG
GAAGCGCCCG GTTGTTTGGG AACACTGGTT GCACCGGAAT TGACCGTGGC AGATCTAGCA
CAGGCTTGGC GATTACCGGT GCTGTTGGTG GCTTCAGCCC AAATGGACTG GCCCGGACAG
GCGATCGCGA TGGTGGCCTT GGCTCAACAA CGGCAGCTAC CGATTTTGGG CGTGATTCTC
AATCAAGTTA CGACTGCAGC TCCCGTTGCA CAGGAATCTT TCCAGTTACT GACTGGCATT
CCTGTGCTGG GAACTTTTCT AGCGGGAGCA GCCCAAGCGG CGATCGCAGA TCAGGCGGCG
ATCGTCCGTA ATTGGGATCT CGAACGCCTA CCCGGATTCC TGCCAGCGAT CGCGAGAGTC
TAG
 
Protein sequence
MRLLISSTSS GAGKSAIAQA LQAYQAWRRQ PVWSLQDWLA SDQSLAERWQ TLQQSEACFL 
EAPGCLGTLV APELTVADLA QAWRLPVLLV ASAQMDWPGQ AIAMVALAQQ RQLPILGVIL
NQVTTAAPVA QESFQLLTGI PVLGTFLAGA AQAAIADQAA IVRNWDLERL PGFLPAIARV