Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2110 |
Symbol | fmt |
ID | 3774329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2190917 |
End bp | 2191900 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800555 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_401127 |
Protein GI | 81300919 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.102637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.6282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGTCG TCTTTTTTGG AACCCCCCAA TTCGCGGTTC CAACTTTGCA GCAGTTGCTT GATGCGCCGG ATGTTGAGGT GATGGCGGTG GTCAGCCAAC CCGATCGCCG CCGAGGGCGG GGTAATCAGG TCAGTGCTTC GCCGGTCAAA GCCCTCGCGA TCGCCTATGA TTTGCCAGTC TGGCAACCGG AACGCCTGCG CCGCGATCCA GAAGTCTTGA GTCAGTTACA GCAAACCCAA GCTGATGCGT TTGTCGTTGT CGCTTACGGC CAGTTACTGC CAGCGGAGGT GCTGGCGATG CCACGACTGG GCTGCATCAA CGTCCATGGT TCGCTGCTGC CGGCCTATCG TGGTGCCGCC CCGATCCAGT GGAGTTTGAT CAACGGCGAT CGCGAAACGG GGATCGTGAC GATGCAGATG GATGTAGGCA TGGATACGGG GCCGATGCTG TTGCGCTGGA CGACCCCGAT CGCCTTGGAC GATAACAGTC AGACCTTGGG CGATCGCTTG GCGACAGCGG GCGCTGAACT GCTCTTACAA ACGCTGCGGC AACTGGATCA GGGGCACCTA ACTGCGATTT CTCAAAACGA GGCTGAAGCG ACCTATGCTC GGCTCCTGCA AAAGGAAGAC TTTCAGCTGA GCTGGGATCA GTCCGCCTTG GAGCTGCATA ACCGGATTCG TGGGCTGTAT CCCGGAGCGA GTCTACCTGT CCAAGGCGAT CGCCTCAAAG TTTTGGCCAG TCTGCCCTTG GGACTAGGTC TGCTCCTGTC GGCGGCCTAT GCAGATTGGC AAGATTGGCA GCCTGATCCA GCAGCTCAGC CAGGGACCGT ATTGGCGATC GCCAAATCCT TGGGGCCGAT CGTGGCGACT CGCGAGGGAG CATTACTACT ACTACAAGTT CAACCGGCAG GCCGCAAACC ACTGAGTGGC TGGGATTGGG CCAACGGCCT GCGCTTGCAA GAAGGGCTGT CTTTGCTGGA GTAA
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Protein sequence | MRVVFFGTPQ FAVPTLQQLL DAPDVEVMAV VSQPDRRRGR GNQVSASPVK ALAIAYDLPV WQPERLRRDP EVLSQLQQTQ ADAFVVVAYG QLLPAEVLAM PRLGCINVHG SLLPAYRGAA PIQWSLINGD RETGIVTMQM DVGMDTGPML LRWTTPIALD DNSQTLGDRL ATAGAELLLQ TLRQLDQGHL TAISQNEAEA TYARLLQKED FQLSWDQSAL ELHNRIRGLY PGASLPVQGD RLKVLASLPL GLGLLLSAAY ADWQDWQPDP AAQPGTVLAI AKSLGPIVAT REGALLLLQV QPAGRKPLSG WDWANGLRLQ EGLSLLE
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