| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2062 |
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| Symbol | |
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| ID | 3774281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2138585 |
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| End bp | 2139820 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637800507 |
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| Product | lycopene cyclase (CrtL-type) |
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| Protein accession | YP_401079 |
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| Protein GI | 81300871 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR01790] lycopene cyclase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGATG CCTTAGTGAT CGGGTCGGGG CCAGCCGGAC TGGCGATCGC GGCAGAGCTG
GCACAGCGCG GCTTGAAAGT CCAAGGACTA TCCCCCGTCG ACCCATTCCA TCCTTGGGAA
AATACCTACG GCATCTGGGG ACCCGAGCTG GATAGTCTTG GCCTCGAGCA TCTCTTTGGG
CATCGCTGGT CGAACTGCGT TAGCTACTTC GGTGAGGCGC CGGTTCAGCA CCAATACAAC
TACGGGCTGT TTGATCGCGC CCAACTACAA CAGCACTGGT TGCGGCAATG TGAGCAAGGC
GGCCTGCAAT GGCAACTCGG CAAAGCAGCT GCGATCGCCC ATGACTCCCA CCATTCCTGC
GTTACGACAG CAGCAGGGCA GGAGTTACAG GCGCGGCTGG TTGTCGATAC GACTGGGCAC
CAAGCGGCTT TTATCCAGCG ACCTCATTCA GACGCGATCG CCTACCAAGC GGCCTACGGC
ATCATTGGCC AGTTTTCGCA GCCGCCGATC GAGCCCCATC AGTTTGTGCT GATGGACTAC
CGCAGCGACC ATCTCTCACC TGAAGAACGC CAACTGCCAC CGACCTTTCT CTACGCGATG
GATCTCGGGA ACGACGTCTA CTTTGTAGAG GAAACATCGC TGGCGGCTTG CCCGGCTATT
CCCTACGATC GCCTCAAACA ACGGCTCTAT CAACGCTTAG CCACTCGCGG TGTGACGGTG
CAAGTGATTC AGCACGAGGA ATATTGCCTG TTTCCGATGA ATTTGCCGCT GCCCGATCTC
ACTCAGTCAG TGGTTGGCTT TGGGGGGGCG GCCAGTATGG TGCATCCCGC TTCGGGCTAC
ATGGTCGGGG CGCTACTGCG GCGCGCTCCT GATCTGGCGA ATGCGATCGC GGCTGGACTG
AATGCCAGTT CCAGTCTGAC CACGGCAGAA CTTGCTACCC AAGCCTGGCG AGGACTCTGG
CCAACCGAAA AAATTCGCAA GCACTACATC TACCAATTCG GCCTCGAAAA GCTGATGCGC
TTTTCCGAAG CCCAGCTCAA TCATCACTTC CAGACCTTCT TTGGCCTGCC GAAGGAGCAG
TGGTACGGCT TTTTGACCAA TACGCTGTCG CTACCGGAGC TGATTCAAGC GATGCTCAGA
TTATTTGCCC AAGCGCCGAA TGATGTGCGC TGGGGTCTGA TGGAACAACA AGGTCGCGAA
TTACAACTCT TTTGGCAAGC GATCGCGGCC CGCTAG
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| Protein sequence | MFDALVIGSG PAGLAIAAEL AQRGLKVQGL SPVDPFHPWE NTYGIWGPEL DSLGLEHLFG
HRWSNCVSYF GEAPVQHQYN YGLFDRAQLQ QHWLRQCEQG GLQWQLGKAA AIAHDSHHSC
VTTAAGQELQ ARLVVDTTGH QAAFIQRPHS DAIAYQAAYG IIGQFSQPPI EPHQFVLMDY
RSDHLSPEER QLPPTFLYAM DLGNDVYFVE ETSLAACPAI PYDRLKQRLY QRLATRGVTV
QVIQHEEYCL FPMNLPLPDL TQSVVGFGGA ASMVHPASGY MVGALLRRAP DLANAIAAGL
NASSSLTTAE LATQAWRGLW PTEKIRKHYI YQFGLEKLMR FSEAQLNHHF QTFFGLPKEQ
WYGFLTNTLS LPELIQAMLR LFAQAPNDVR WGLMEQQGRE LQLFWQAIAA R
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