| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2049 |
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| Symbol | psaA |
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| ID | 3774268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2123745 |
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| End bp | 2126036 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800494 |
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| Product | photosystem I P700 chlorophyll a apoprotein A1 |
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| Protein accession | YP_401066 |
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| Protein GI | 81300858 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01335] photosystem I core protein PsaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.986911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATAA GCCCACCGGA GCGAGAAGCG AAGGTGAAGG CGACGGTTGA TAAAAATCCG
GTTCCGACTT CTTTTGAGAA GTGGGGTAAG CCGGGTCACT TCGACCGGAC GCTGGCCAAA
GGACCCAAAA CCACAACTTG GATTTGGAAC CTTCACGCTA ACGCTCACGA TTTCGATAGT
CATACCAGTG ACCTTGAAGA TATTTCACGG AAAATCTTCA GCGCTCACTT TGGTCACCTT
GCGGTGATCT TTATCTGGTT GAGCGGCGCT TACTTCCATG GCGCTCGCTT CTCCAATTTC
AGCGGCTGGC TGGCCGATCC AACCCACGTC AAGCCCAGTG CCCAAGTCGT TTGGCCGATC
TTCGGACAGG AGATCCTCAA CGGCGATGTT GGCGGTGGCT TCCATGGCAT TCAGATCACC
TCCGGTCTGT TCCAGCTCTG GCGGGCCTCC GGCTACACCA ACGAGTTTCA GCTCTACGTC
ACGGCGATCG GTGCGCTCGT GATGGCGGGT CTCATGCTGT TTGCTGGCTG GTTCCACTAC
CACAAAGCAG CTCCCAAGCT GGAATGGTTC CAAAACGTCG AATCGATGTT GAACCACCAC
TTGGCTGGCT TACTCGGTCT GGGCAGCTTG TCCTGGGCGG GTCACCAGAT TCACGTGTCG
CTGCCGGTCA ACAAACTGCT GGATGCGATC GACGCTGGCG AACCGTTGGT TCTCAACGGC
AAAACCATCG CTTCTGCGGC TGATATTCCG CTGCCGCATG AGTTCTTGGA TGTCAGCCTG
ATCTCGCAGC TGTTCCCGGG CTTTGAAGCC GGTGTGAAAG CCTTCTTCAC GCTCAACTGG
TCAGCCTATG CCGACTTCCT GACCTTCAAA GGTGGCCTGA ACCCCGTCAC CGGTGGCCTC
TGGCTGACCG ATACGGCTCA CCACCACTTG GCGATCGCCG TCCTCTTCAT TGTTGCGGGT
CACATGTACC GCACGAACTG GGGTATCGGC CACAGCCTCA AAGAAATCTT GGAAGCTCAC
AAAGGTCCTT TCACTGGCCA AGGCCACAAA GGTCTCTATG AGATTCTGAC CACTTCTTGG
CATGCCCAAC TGTCGATCAA CCTAGCCATC CTGGGTTCGA TCAGCATCAT CGTGGCTCAC
CACATGTACG CGATGCCTCC GTATCCGTAC TTGGCGACCG ACTACCCGAC GATGCTGTCA
CTGTTTACTC ACCACATCTG GATTGGTGGG TTCCTGATCG TCGGTGCTGG TGCTCACGCT
GCCATTTTCA TGGTGCGGGA CTACGATCCG GCCAAGAATG TCGACAACCT CCTCGATCGC
GTTCTGCGTC ACCGCGATGC GATCATCAGC CACCTGAACT GGGTGTGCAT CTGGCTAGGC
TTCCACAGCT TCGGCCTCTA CATCCACAAC GACACGATGC GTGCGTTGGG CCGTCCCCAA
GACATGTTCT CGGATTCGGC GATTCAACTG CAGCCCATCT TTGCGCAGTG GATCCAAAAC
ATTCATGCCC TTGCACCGGG TAACACTGCT CCTAACGCCC TGGCTTCGGT CAGCCAAGTG
TTTGGTGGCG ATGTGGTTGC AGTCGGCGGC AAAGTCGCTG CTGCCCCGAT TGTGCTGGGT
ACTGCGGACT TCATGGTCCA CCACATCCAC GCCTTCACGA TTCACGTCAC GGCGCTGATT
CTCCTCAAGG GCGTTCTCTA CGCTCGGAGT TCGCGTCTGG TTCCTGACAA AGCCAACCTT
GGCTTCCGGT TCCCCTGCGA CGGCCCTGGC CGTGGCGGCA CCTGCCAAGT CTCTGGTTGG
GACCACGTGT TCCTAGGCTT GTTCTGGATG TACAACTCCC TGTCGATTGT AATTTTCCAC
TACAGCTGGA AAATGCAGTC CGATGTTTGG GGTTCCGTGC TGCCTGATGG TTCGGTAGCG
CACATCGCGA ATGGCAACTT TGCTCAAAGT GCCCTCACGA TCAATGGCTG GTTGCGTGAC
TTCCTGTGGG CGCAAGCGTC TCAGGTGATC ACCTCCTACG GCAGCTCGAC CTCTGCCTAT
GGCCTGCTGT TCTTGGGTGC TCACTTTGTC TGGGCCTTCA GCTTGATGTT CCTGTTCAGT
GGCCGTGGCT ACTGGCAAGA GCTGATCGAG TCCATCGTCT GGGCTCACAA CAAGCTCAAA
GTGGCTCCTG CCATCCAACC GCGTGCGCTC AGCATCATCC AAGGCCGGGC AGTGGGCGTT
GCTCACTACC TACTGGGTGG AATTGTGACC ACATGGTCTT TCTTCCTGGC CCGCATCATT
GCAGTTGGTT AG
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| Protein sequence | MTISPPEREA KVKATVDKNP VPTSFEKWGK PGHFDRTLAK GPKTTTWIWN LHANAHDFDS
HTSDLEDISR KIFSAHFGHL AVIFIWLSGA YFHGARFSNF SGWLADPTHV KPSAQVVWPI
FGQEILNGDV GGGFHGIQIT SGLFQLWRAS GYTNEFQLYV TAIGALVMAG LMLFAGWFHY
HKAAPKLEWF QNVESMLNHH LAGLLGLGSL SWAGHQIHVS LPVNKLLDAI DAGEPLVLNG
KTIASAADIP LPHEFLDVSL ISQLFPGFEA GVKAFFTLNW SAYADFLTFK GGLNPVTGGL
WLTDTAHHHL AIAVLFIVAG HMYRTNWGIG HSLKEILEAH KGPFTGQGHK GLYEILTTSW
HAQLSINLAI LGSISIIVAH HMYAMPPYPY LATDYPTMLS LFTHHIWIGG FLIVGAGAHA
AIFMVRDYDP AKNVDNLLDR VLRHRDAIIS HLNWVCIWLG FHSFGLYIHN DTMRALGRPQ
DMFSDSAIQL QPIFAQWIQN IHALAPGNTA PNALASVSQV FGGDVVAVGG KVAAAPIVLG
TADFMVHHIH AFTIHVTALI LLKGVLYARS SRLVPDKANL GFRFPCDGPG RGGTCQVSGW
DHVFLGLFWM YNSLSIVIFH YSWKMQSDVW GSVLPDGSVA HIANGNFAQS ALTINGWLRD
FLWAQASQVI TSYGSSTSAY GLLFLGAHFV WAFSLMFLFS GRGYWQELIE SIVWAHNKLK
VAPAIQPRAL SIIQGRAVGV AHYLLGGIVT TWSFFLARII AVG
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