Gene Synpcc7942_2046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2046 
Symbol 
ID3774265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2118062 
End bp2118451 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content56% 
IMG OID637800491 
Productglycine cleavage system protein H 
Protein accessionYP_401063 
Protein GI81300855 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGA TCTACCCTGA CAACCTTCGC TACTTCGACA GTCACGAGTA CGTCCGCCTT 
GATGGTGATA TTGCCGTCAT TGGCATCAGC GCCTACGCCA TCGACCAGTT GGGCGACATC
GTTTTTCTCG AGCTTCCTGA GGTTGGCAGC ACGATCGCGA TCGGAGCCAG TTTTGGCACC
GTCGAGTCGG TCAAAGCAGT AGAGGAAGTC TACGCGCCGG TGACCGGCGA GATCATCGAG
CGCAACGAAG CCGCACTAGA AGCCCCAGAA ATTCTCAACA GCGATCCCTA CGAACAGGGG
TGGTTGCTCA AGGTGCAGTT GACGGGCAAG CCGGATTTGT CAGACTCCTA CGATGCAGCC
CAGTATCAAG CTCTGGTTGA GGGTCAGTAG
 
Protein sequence
MALIYPDNLR YFDSHEYVRL DGDIAVIGIS AYAIDQLGDI VFLELPEVGS TIAIGASFGT 
VESVKAVEEV YAPVTGEIIE RNEAALEAPE ILNSDPYEQG WLLKVQLTGK PDLSDSYDAA
QYQALVEGQ