| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2022 |
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| Symbol | nusA |
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| ID | 3774209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2090378 |
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| End bp | 2091703 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800467 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_401039 |
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| Protein GI | 81300831 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.142374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATGG TCACCCTGCC CGGCCTAGAG CAGCTGATCT ACGCCATTAG CGAGCAAAAA
AAACTGCCCG CCAATGTCAT TGAAGAAGCC CTCAAAGAAG CCTTGCTCAA GGGCTACGAG
CGCTATCGCC GTACCCAGCA GATGGGTGAG CAGTTTGAAG AAGACTACTT CGACAACATT
GACGTTGAAC TCGATGTCGA ACAGGAAGGC TTTCGGGTAC TGGCAACCAA AACCATCGTC
AATCAGGTCG AAAATCCTGA CCATCAGATT GCCCTCGCCG ATGTTCAGGA AGTGGCTCCA
GATGCCCAAG CAGGCGAAAT CGTCGTTCTA GATGTCACAC CCGATAAAGA CGACTTTGGG
CGAATGGCGG CTATTCAGAC TAAGCAAGTC CTGTCGCAAA AACTGCGCGA TCACCAGCGC
AAACTGATCC AAGAAGAGTT CCAAGATCTA GAAGATCCGG TCTTGATGGC CAAGGTGCTG
CGCTTCGAGC GCCAGTCTGT GATCTTGGGG GTCAGCAGTG GTTTAGGACG TCCTGAAGTC
GAGGCAGAAC TGCCCCGTCG CGAACAACTG CCCAACGATA ACTACCGGGC CAACGCCACC
TTCCGCGTCT TCCTCAAGGA AGTCAGTGAA GTACCCCGTC GTGGACCGCA GTTGATTGTC
TCTCGGGCTA ACGCCGGTCT GGTTGTCTAC TTGTTCGAAA ACGAAGTTCC TGAAATCCAA
GATGGTGTCG TCCGCATTGT GGCGGTAGCG CGGGAAGCGA ATCCGCCGAC TCGGCATGTT
GGGCCGCGCA CCAAAATCGC TGTCGATACC TTGGAACGCG AAGTCGATCC GGTTGGGGCT
TGCATCGGGG CGCGGGGATC GCGGATTCAG GTGGTCGTCA ACGAATTGCG GGGCGAAAAA
ATTGATGTGA TCCGCTGGTC GCCGGATCCG GCCACCTATA TTGCCAATGC CCTCAGCCCT
GCCCGGGTTC AGGAAGTGCG CTTGGTCGAT CCCGAAGGTC GGATCGCCCA CGTTTTGGTC
AACGACGACC AACTCAGTCT CGCGATCGGC AAAGAGGGTC AGAACGTGCG CCTCGCGGCT
CGACTGACCG GCTGGAAAAT CGACATCAAG GACGTGGCGC TCTACGACGC AGTCACGGAA
GGTCAACGGA TTTCTGAACT GATTCAAGAA CGCCAAGAGC GGGCGGCGAT TGCTGCCGAA
GAAGAAGCCC GTGCTGCCGC CGAAGCTGCT GAACTGGCGG AATGGGAGGC GGAAGAGGCT
GCTCTCGCAG CCGCTGAAGC TGCGGCAGAA CTCGCAGCTG CTGAAGCTGA GGAAGAGACT
GTTTGA
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| Protein sequence | MSMVTLPGLE QLIYAISEQK KLPANVIEEA LKEALLKGYE RYRRTQQMGE QFEEDYFDNI
DVELDVEQEG FRVLATKTIV NQVENPDHQI ALADVQEVAP DAQAGEIVVL DVTPDKDDFG
RMAAIQTKQV LSQKLRDHQR KLIQEEFQDL EDPVLMAKVL RFERQSVILG VSSGLGRPEV
EAELPRREQL PNDNYRANAT FRVFLKEVSE VPRRGPQLIV SRANAGLVVY LFENEVPEIQ
DGVVRIVAVA REANPPTRHV GPRTKIAVDT LEREVDPVGA CIGARGSRIQ VVVNELRGEK
IDVIRWSPDP ATYIANALSP ARVQEVRLVD PEGRIAHVLV NDDQLSLAIG KEGQNVRLAA
RLTGWKIDIK DVALYDAVTE GQRISELIQE RQERAAIAAE EEARAAAEAA ELAEWEAEEA
ALAAAEAAAE LAAAEAEEET V
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