Gene Synpcc7942_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2021 
Symbol 
ID3774208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2090088 
End bp2090381 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content61% 
IMG OID637800466 
Producthypothetical protein 
Protein accessionYP_401038 
Protein GI81300830 
COG category[K] Transcription 
COG ID[COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.158983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTCGGC TGCCCCAAGG GTATCGACGC TGTATTGCTT GCCGGCGACT CGCTCACCGG 
CAGGAATTCT GGCGAGTTAT TCGGCTGGCA AGTACCGGAG CGATCGCCCT CGATCAGGGT
GAAGGGCGAT CGGCCTATCT CTGTCCAACC GTGGCTTGCT TCAACCAGGG TCGCCGCAAA
AATCGTCTGG GGCGAGCCCT GCGATCGGCG ATTCCTGACT CCGTTTGGGT GGCCCTCGAA
GCAAGGCTGA GTGTGACAAT CTGCCCGAGC CTGTCAGAGG GCTCTGACGG ATAG
 
Protein sequence
MSRLPQGYRR CIACRRLAHR QEFWRVIRLA STGAIALDQG EGRSAYLCPT VACFNQGRRK 
NRLGRALRSA IPDSVWVALE ARLSVTICPS LSEGSDG