| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2020 |
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| Symbol | infB |
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| ID | 3774207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2086845 |
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| End bp | 2089937 |
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| Gene Length | 3093 bp |
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| Protein Length | 1030 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637800465 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_401037 |
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| Protein GI | 81300829 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.340482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATG GCAAGGTCAG AATTTACGAA CTGTCGAAGG AGTTAAACCT CGACAACAAG
GATGTGCTGG CCGTCTGCGA TCGGTTGGAA ATTCCCTATA AGAGCTACAG CAGTACGCTC
AGTGAAGAGC AAGTCGTCCA AGTGCGCCAA GTTTTAGCTG GGGCGGCCCC ATCAGAACCC
GTGGCAGCGG CCTCTGCCGC TGATTCGCCC AAGGCAGAGC GCAAGCAGGA AATCGTGTCA
GTTCGTCGCC CGACTCCCCA AGCAGCCGGC GGTGCTAAGC CGGAAATCGT GGGTCGTCCC
ACAGCGTCCG AGAAGCCTCA AGCGGAGCGC CCCAACATCG TGGCGCCGCC CCGTCGTCCG
GCTGCTGCGA ATGAGCCTGC CAAGGCACCC ATCAAGCCTG CGCGTCCTGA AAAATCGGCT
GAGAAGCCTG AAATTGTTAC GCCTCGCCCC CCCGCTCCAG CCGCCAGTGC TGAGCCTGCC
AAATCTCCGA GTCGTCCAGC GCCAGCTGCC ACGCCGCGCC CGGTTGCCGA AACCAAGAAG
CCAAAACCAG CAGCAGCCGA GCTTCTGCGC AAGCCAGAAA TCGTGCGGCG CAGCGAGGCA
AAACCGGAGC GCACCAGTGA AGCTCCAACG CCACGACCCA AAATTGAGCG TCGACCGGAG
CAAACGGGTC CAGCAAGACC GCAGCTCGGT CAGCCAGTGG CTGGCAATGG CGTTAGTAAG
CCTGCTAAGC CAGTCAAGCC GATTGAATTG GTTGCGCCGC CCTCACGTCC CAAAGTGGCT
GCTAGTGCCA GCGGAGTGCC TGCCGCTGCC TCGCGGGTTC TGCCCAATAA GCCCCAGAAG
CCCACAGCTC CCGGCGGCCC AGAGCTGAAG CAACGGCCCA AACCAGCAGC TCCTGCCAGC
GGAGAAGACT TAGCGGCCAC AGTGGATGTC TTCCAACCGG TACCGCCGTT GGAACTGCGT
CGGCCGACAG CCCCAGCGCG TCCGGCTCGT CCCCGCAAAG GGTGGGAGGA AGAGGAAGAC
GAACGGGCAG CAGCGAACCG TAAGGCCGGT AACAAAGCGG CTGCGAAGGC GAAGCGTCGT
CAGCTCATTC AAGATGATGA CGATGATGAT TTGCTGACGG CTGAGCAGGA GCTAGCAGCG
GCGGACGCTT TGAACTTGGC GATGTCCTTG GCACGTCCGA GCAAGCCCAA AGTTCCTCAG
GCCAAGCCAG CCGTCGCCGT GATGCCCACC AAAGGGCGGA AGCCTCGGCG GGAGTCGGCC
CGTGAGCGGC AGCATCGTCG TCGGATGGAG CGGGAGCAAA AGCCAGTCCG TCCTGAGCTA
ATCAGTCTGC GATCGAGCAT GACGGTGCAA GAGTTAGCGC AGCTGATGGT GGTGCCCGAA
ACAGACATCA TCAAGTCCCT GTTCTTCAAG GGCATTGCAG CGACGGTGAC TCAATCGCTG
GATGTCGCCA CGATTGAACA AGTGGCTGAA GAATTCGGCA TTCTTGTGGA GCAAGAGACT
GAGGAGTCCG GGGCTCGCAA AACGACCCAG ATGGTTGAAG ATGCCGACGC TGAAAGTCTG
CAGACTCGCC CGCCTGTCGT TACGGTTATG GGTCACGTGG ACCACGGTAA AACCACTCTG
CTTGATGCGA TCCGGAAAAC TCGGGTTGCT GCAGGTGAAG CTGGGGGCAT TACCCAGCAC
ATCGGTGCCT ATCACGTTGA TGTGGAACAC AACGGCGATC AACATCAGAT CGTCTTCTTG
GATACGCCGG GCCACGAAGC CTTCACGGCC ATGCGGGCAC GGGGTGCTCG GGTCACCGAC
ATTGCCATTT TGGTGGTAGC CGCTGATGAT GGCGTCCGGC CTCAAACCCT AGAAGCCATC
AGCCACGCCA AAGCGGCGGA AGTGCCCCTA ATTGTCGCAA TCAACAAGTG TGACAAGGAA
GAAGCGCAGC CCGATCGCGT CAAACAAGAG CTGACGGAAT ACGGTTTGGT TCCGGAAGAG
TGGGGTGGTG AAACGGTCAT GGTGCCGGTC AGCGCCATCA AAGGCGAAAA CATCGACCAG
CTGCTGGAAA TGATCCTGCT GGTGACTGAG GTTGAAGAAC TGGTCGCCAA CCCCGATCGC
GCAGCGCGGG GCACAGTGAT CGAAGCTCAC CTTGACAAAG CTCGGGGGCC GGTGGCGACC
CTCTTGGTCC AAAACGGCAC CCTGCGCGTC GGTGATGTGC TCGTTGCTGG CTCTGTCCTC
GGCAAAGTGC GAGCCATGGT TGATGATCGC GGCGATCGCG TCGAAGCGGC AACCCCATCC
TTCGCCGTTG AGGTGCTGGG GCTCGGCGAC GTGCCGGCTG CAGGCGATGA GTTTGAAGTC
TACAGCGACG AGAAAAGTGC TCGGGCCGTG GCCACTAGCC GTGCTGACGA GCAACGTCAG
TCTCGCCTCC AGCAGGCGAT GGCTTCGCGC CGAGTCTCCC TGGGTACTGT GTCGGCGCAG
GCTCAAGAAG GCGAGCTGAA GGAACTCAAC CTAATTCTCA AGGCCGACGT TCAAGGTTCC
GTGGAAGCCA TCCTTGGCTC CTTAGAGCAA CTACCGCAGA AGCAAGTCCA AGTGCGTGTT
CTCTTGGCAG CACCGGGTGA AATCACTGAA ACAGACGTCG ACTTAGCGGC TGCTTCTGGT
GCAGTGATCG TTGGCTTCAA CACGACGCTG GCCAGCGGTG CGAAGCGGGC TGCCGATGAA
GCGGGTGTGG ATGTTCGGGA CTACGACATC ATCTACAAGC TGCTAGAAGA TATCCAAGCG
GCAATGGAAG GTCTGCTCGA ACCCGAATTG GTCGAGGAGC CCCTGGGGCA AGTCGAGGTG
CGAGCCGTCT TCTCGATTGG TCGCGGTGCT GTGGCTGGTT GCTATGTCCA GTCGGGCAAG
GCGATTCGCA ACTGCAACAT TCGCGTCCGG CGCGGTTCCA ACTTGGTCTA CACCGGTACC
TTGGATTCGC TGAAGCGGAT GAAGGAAGAC GTGAAGGAAG TCAACTCCGG CTACGAATGT
GGGATTGGCC TCGACAGCTT CAGTGCTTGG CAAGAAGGTG ACATCATCGA GACCTATCGA
ATGGTCACCA AGCGCCGCAC CTTGGAAGTG TAG
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| Protein sequence | MNNGKVRIYE LSKELNLDNK DVLAVCDRLE IPYKSYSSTL SEEQVVQVRQ VLAGAAPSEP
VAAASAADSP KAERKQEIVS VRRPTPQAAG GAKPEIVGRP TASEKPQAER PNIVAPPRRP
AAANEPAKAP IKPARPEKSA EKPEIVTPRP PAPAASAEPA KSPSRPAPAA TPRPVAETKK
PKPAAAELLR KPEIVRRSEA KPERTSEAPT PRPKIERRPE QTGPARPQLG QPVAGNGVSK
PAKPVKPIEL VAPPSRPKVA ASASGVPAAA SRVLPNKPQK PTAPGGPELK QRPKPAAPAS
GEDLAATVDV FQPVPPLELR RPTAPARPAR PRKGWEEEED ERAAANRKAG NKAAAKAKRR
QLIQDDDDDD LLTAEQELAA ADALNLAMSL ARPSKPKVPQ AKPAVAVMPT KGRKPRRESA
RERQHRRRME REQKPVRPEL ISLRSSMTVQ ELAQLMVVPE TDIIKSLFFK GIAATVTQSL
DVATIEQVAE EFGILVEQET EESGARKTTQ MVEDADAESL QTRPPVVTVM GHVDHGKTTL
LDAIRKTRVA AGEAGGITQH IGAYHVDVEH NGDQHQIVFL DTPGHEAFTA MRARGARVTD
IAILVVAADD GVRPQTLEAI SHAKAAEVPL IVAINKCDKE EAQPDRVKQE LTEYGLVPEE
WGGETVMVPV SAIKGENIDQ LLEMILLVTE VEELVANPDR AARGTVIEAH LDKARGPVAT
LLVQNGTLRV GDVLVAGSVL GKVRAMVDDR GDRVEAATPS FAVEVLGLGD VPAAGDEFEV
YSDEKSARAV ATSRADEQRQ SRLQQAMASR RVSLGTVSAQ AQEGELKELN LILKADVQGS
VEAILGSLEQ LPQKQVQVRV LLAAPGEITE TDVDLAAASG AVIVGFNTTL ASGAKRAADE
AGVDVRDYDI IYKLLEDIQA AMEGLLEPEL VEEPLGQVEV RAVFSIGRGA VAGCYVQSGK
AIRNCNIRVR RGSNLVYTGT LDSLKRMKED VKEVNSGYEC GIGLDSFSAW QEGDIIETYR
MVTKRRTLEV
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