Gene Synpcc7942_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1930 
Symbol 
ID3775293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2004305 
End bp2005048 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content59% 
IMG OID637800372 
Producthypothetical protein 
Protein accessionYP_400947 
Protein GI81300739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCTT TTCCCGCCGA TCTTGAAACC GCTGTCGAAC AGGCCAAGGA GGCAGCCCAG 
CGGGCCCTTG CCGCCGGATT GACCCGCATT CAAGTTGACC TAGCGATCCC AGAGCTCAAA
ATTCAGCCGA TCGCTTGGCA GTTTTTAGCG GCTTTCCTCG ACCGAGGAGC TAAGCTGCGG
GTCTTCTTCC CCGATCCGGG CGCTGCGGCC CTAGCTCGGC GTGATTGGGG AGAGCTACCG
TTTTCAGTGC GGGGCATGGA GGAGCTGAAA GCAGCCGTAC AGCCCGAGGA AGAGCTGTTT
ATTTTCATTG AGCCCTCGTC GGTTGAAGTC CAGCGGTTGG AACAACTCTG TCAAGAGATT
GGCGATCGCC CCGTGATCTT GTTGAACCCG CGATTGGAGG ATGTGGCCAC CATTGGCATT
GGCTATGCAG CGCGGCAACT GCGGGAACGC TTTCTGAATC AGTGGCAGTC GGCTTACTAC
CTCTCGCCTT TGGAAGGGGC CGCCATTTTT CAGGCCTACC CGCAGCGCTG GCAGGTGTGG
CAAGAAACCG ACACTGGCTA TGAGCTGCTG CAGGAATATG ACCAACGACC CAACGGGGAA
GACCTCGATC GGCTCTTTGC CGGCCTTGCC CCCGTGGATG TCGAGGTGCC CCTTGGGGTG
GCAGCTCCAA CAGCCCCTAC GCGACCGAGT CGTGGCGGTC TCTTGAACGA ATTACAACGC
TTTCTCCGAG CCCTCGGGAG CTGA
 
Protein sequence
MLAFPADLET AVEQAKEAAQ RALAAGLTRI QVDLAIPELK IQPIAWQFLA AFLDRGAKLR 
VFFPDPGAAA LARRDWGELP FSVRGMEELK AAVQPEEELF IFIEPSSVEV QRLEQLCQEI
GDRPVILLNP RLEDVATIGI GYAARQLRER FLNQWQSAYY LSPLEGAAIF QAYPQRWQVW
QETDTGYELL QEYDQRPNGE DLDRLFAGLA PVDVEVPLGV AAPTAPTRPS RGGLLNELQR
FLRALGS