Gene Synpcc7942_1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1921 
Symbol 
ID3775284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1998203 
End bp1998655 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content59% 
IMG OID637800363 
Producthypothetical protein 
Protein accessionYP_400938 
Protein GI81300730 
COG category[S] Function unknown 
COG ID[COG2105] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.766298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAGC AGTCCTCTCC AGCACCGCTC TCGGTCTTCG TCTACGGCAC GCTGCAGCCA 
GGTCAGCATT ACTATCAAGT GCTCAATCTG GAGCCATGGC TCGTTGCAGC CGTCCCCGCT
CAAGTACCGG GGAGGGTCTA TGCACTGCCA GCGGGCTATC CGGCCCTCAC TGAAGAAGAG
GGTTGGGTAC GGGGCGTGCT TCTGCAGTTG CGATCGCCGG ACCTCTTGGA TCGACTCGAT
GATCTAGAAG GCTATGCTCC CAATCGCGAT CGCAGTCTCA ATCTTTATCA GCGCTGCTGG
GAACCGGTCT ACGACCTTCA GCAACAGCCA CTCGGGGAAG CTTGGCTCTA CCGCATGGCA
ATCGCAGAAG TGACACGTCA GGGGGGAATC GCTGTAGCAG ATGGCTACTG GAGCGCAGCA
ATTCAGGCCG AACTCTGGGG CCAGAGCCTG TGA
 
Protein sequence
MPQQSSPAPL SVFVYGTLQP GQHYYQVLNL EPWLVAAVPA QVPGRVYALP AGYPALTEEE 
GWVRGVLLQL RSPDLLDRLD DLEGYAPNRD RSLNLYQRCW EPVYDLQQQP LGEAWLYRMA
IAEVTRQGGI AVADGYWSAA IQAELWGQSL