Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1921 |
Symbol | |
ID | 3775284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1998203 |
End bp | 1998655 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800363 |
Product | hypothetical protein |
Protein accession | YP_400938 |
Protein GI | 81300730 |
COG category | [S] Function unknown |
COG ID | [COG2105] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.766298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTCAGC AGTCCTCTCC AGCACCGCTC TCGGTCTTCG TCTACGGCAC GCTGCAGCCA GGTCAGCATT ACTATCAAGT GCTCAATCTG GAGCCATGGC TCGTTGCAGC CGTCCCCGCT CAAGTACCGG GGAGGGTCTA TGCACTGCCA GCGGGCTATC CGGCCCTCAC TGAAGAAGAG GGTTGGGTAC GGGGCGTGCT TCTGCAGTTG CGATCGCCGG ACCTCTTGGA TCGACTCGAT GATCTAGAAG GCTATGCTCC CAATCGCGAT CGCAGTCTCA ATCTTTATCA GCGCTGCTGG GAACCGGTCT ACGACCTTCA GCAACAGCCA CTCGGGGAAG CTTGGCTCTA CCGCATGGCA ATCGCAGAAG TGACACGTCA GGGGGGAATC GCTGTAGCAG ATGGCTACTG GAGCGCAGCA ATTCAGGCCG AACTCTGGGG CCAGAGCCTG TGA
|
Protein sequence | MPQQSSPAPL SVFVYGTLQP GQHYYQVLNL EPWLVAAVPA QVPGRVYALP AGYPALTEEE GWVRGVLLQL RSPDLLDRLD DLEGYAPNRD RSLNLYQRCW EPVYDLQQQP LGEAWLYRMA IAEVTRQGGI AVADGYWSAA IQAELWGQSL
|
| |