Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1891 |
Symbol | |
ID | 3775254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1964412 |
End bp | 1964972 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637800332 |
Product | hypothetical protein |
Protein accession | YP_400908 |
Protein GI | 81300700 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.248989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.794198 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTTC GCCCTAGTCG CTTGGCCATC TTCATTGATG GTAATAATAT GTTCTATGCA CAGCAAAAGA ACGGTTGGTT CTTTGATCCT CGTCGAGTGC TGAACTATTT TGCGAATCGA CCAGAAATTG AGCTGGTTAA CGCTTATTGG TATACCGGTC TCAAAGATCC CCAAGATCAA CGGGGGTTTC GGGACGCACT AGTTAGCTTA GGCTATACCG TGCGGACGAA AATGCTGAAG GAGTTTCATG ATGAGTCCAA CGGCAATCGT TATTTTCAGA GAGCTAACTT AGATATTGAA ATCGTTATTG ATATGTTCAA TACGGTTGAG CAATATGATG AAATTGTGCT CTTCAGTGGC GATGGTGATT TCGAGCGTGC CATTGAACTG CTGCGCGCCA AGCAGACTCA CATCACTGTC GTATCGACCG ATGGCATGAT CGCGCGTGAG TTACGGAATG CCACTGATCG CTACATCGAT CTGAACGATA TTCGCAGTTT TATCGAAAAG ACTGAGCGCC CTGAACCGTT TGTCAGTGCT CCCGTCATTG CTCCGGCATG A
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Protein sequence | MAFRPSRLAI FIDGNNMFYA QQKNGWFFDP RRVLNYFANR PEIELVNAYW YTGLKDPQDQ RGFRDALVSL GYTVRTKMLK EFHDESNGNR YFQRANLDIE IVIDMFNTVE QYDEIVLFSG DGDFERAIEL LRAKQTHITV VSTDGMIARE LRNATDRYID LNDIRSFIEK TERPEPFVSA PVIAPA
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