| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1811 |
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| Symbol | |
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| ID | 3774386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1880981 |
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| End bp | 1884094 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637800252 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_400828 |
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| Protein GI | 81300620 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.688838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.296213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTG ACTTTCAGAC TTTAGCTATT ACCCTCATCA TTCTCAATAG TCTGCAGACA
ACTGCTCTGA TCATCCAAGC GCGCCTAATG CAGTTCACAC CCAAACTGGA TCGCTGGGGA
GCTGGCAACG TCTGTTTTAT CCTTGGTTTA GCACTACACG TATTTACCAG CAATAATACG
GTGAGCCGAG TGAGTGCTGA TGCAGCACTA ATCCTTGGCT CAGCACTGAT CTATTTAGGG
ACCCAAAACA TCCTAGGTCT ACCCCATCCA TGGGGAAGAC GTTCTTTTCA GCTCACAATT
TTGAGTAGTT GGGCAGCGCT TGGAGTCATT GAAGCTAATG CTCCAGCCTC TTCGCTTTCT
CAAGCTATTT TGACAGGTAC GATCGCTCTT TGTTCTGGCC TAACAGCAAG ACTTCTCTAC
TTTTATCGTC AGCAGTTTCT TTTAATTCCA GCTCTTTTTC TGGGCAGCAT ATTTCTAATT
GCTACGTTTG CTTGTAGCGG TATGGCTATG CTAGCAATTC TCGATTTAGT CAATGATCGT
TGGATTCAGC TAAGTTTTTT GCAGTTAGCA ACTGACTTTC AGCTTTTAAT TACAAGTACG
CTGTGGACTT TTGGTTTAAT TTTAACAGTA AATCAACAAG CGATCGCTGT TAGCAAAGAA
GAACAGGCAA CGACAGAGCA AATTTTCGAT GTAAGTCCCG ATGCTATTCT AATTACACAA
CTTTCAGATG GTCTAATTGT TAGGGTTAAT CAAAGTTTTC TAGAGCTAAT TGACCAACCT
AAAGAAAATG TCATTGGAAG ATCAATTCTT GATCTGAACT TTTGGAAAAA TCAGCACGAT
CGCAGTCGGA TGATCGATTG TCTCTTATCC CAAGGCTCTT GTGAAGACCT GGAAGTTGGA
TTACAACGTC CCGATCAGAG TAATTTTATT GGACAAGTTA CAGCTAAACT TATTAAAATA
AATTCAAAGT TTCATATTAT TAGCACTATT CATGATGTGA CTCAGCGCCG GAAATCTGAA
GACTTATTAC GGCAGAGTGA AGAGCGTCTT GAGCTTGCAT TTCAGGGATC TTTAGCAGCA
ATTTGGGACT GGGATCTCGT TACTAGCGAT CTTTATTTTT CTTCTCGTTC CCTTGAAATT
TTAGGGTATC AAGAAGGTGA CATTCCCCCA AAAATCTCAA GCTTTTTCAG TCTTTTACAT
CCCGATGACC GTATTTTTGT TCAATCAGCT TTAGATGCTC ATTTTTCATC AGCTAAATAT
CCTTACGATG TGGAGTATCG TATTCAACAA AAATCAGGAG AATATCGCTG GTTTCAGTCA
ACCGGAATTG CCGTTCGAGA TGAACAAAAC AAGCCTTATC GCATGGTAGG GTCGACAATT
GATATCACTA GACGAAAGCA GGCTGAAGAG GCATTGCGAG AGAGCGAACA AAACTATCGC
ACTGTTGTCA ACTCTGGGCA TGTTCTCATC TGGTTGGCAG ACAAAAATGG AGACCATTAT
TATTTCAATT CAGTTTGGCT TAACTTTACT GGACGTTCTT TAGAGCAAGA ATTAGATAGC
GGGTCTATTG AAGGAGTTTT ATCGGCAGAT CTTCAAAGCT ACTTGAGTAA TTACAGAACT
GCTTTCTCAC AACACAATAG TTATAAGGCT GAATACCGTT TACGTCGTCA CGATGGTGAA
TATCGTTGGA TTCTTGAGGA GGGGAGCCCT AGATACGACA CTCATGGAAA CTTCATTGGA
TACATAGGTC ACTGCTTAGA TATTCACGAT CGCAAGATTG CCGAAACAGC GTTATATCGT
GAGCAAGAAT TTACACGGAT TCTTTTAGAT AGTTTGAGTG ATGGTGTAGT TGCCTGCGAT
GCTGAAGGGA ACTTAGTACT TTTCAATCAA GTTGCGAGAA GCTGGCATAG CTACTTACCC
CCCCGCTCTT CAGCCAGCGA ATGGAGTGCC CTCTATAACA TCTATCAACC CAATGGATCT
GATCTTATGC CGACTGATGC TCTACCGTTA TTCAGAGCAT TCCGTCATGA GATAGTTCAA
GATGTTGAAA TGATGATCAA AGATCCATCC AAGTCAGAAC GATGGGTCGT TTGTTCAGGT
GGGCCTTTTT TTGATGATCA GAATCAATTT TTAGGCGCTG TCATTGCCAT GCGCGATGTT
ACAGCTGAGA GAAAAACAAA ACAACAACTT CAAGAAGCTT TAGTAGAAGC ACAACGTCTT
CGAGCGGCAC TCGATCAGGT CAGCTCTCAT ATCTATATGA AAGACCTTCA GTTTCGTTAC
ATCTATGCCA ATAGATCGGC TTTAGATTTT GTTGATCGCT CTTTGGAAGA AATCTTGGGC
AAGGATGATT TTTTCTTTTT CTCCGAAGAG GCTGCAAAAT TATTACAAGC TATCGACTCT
CGTGTTTTCC AAGGAGAGCA GACTACGGAA GAAATCCATC TCGTCAACCC TAAAGATGGA
CAATTACGAG TCTACCTAGA AATCAAAACG CCTATCTATG AATCGGCACA AAGTAGTAAT
ATTATTGGAT TACTCGGTAT TTCAACTGAC ATTACTGAAC AAAAGAAGCT AGAACAAAAA
TTGCAGCAAC AGGCAACAAC AGATGCCCTG ACTGGCATTC TGAATCGCCG TCAGTTTATT
ACACTTGCTC AAGCTGAACT TAACCGAATC TATCGTATCC AACGTGACAC TTCACTCTCT
TTAGTGATCA TTGACATCGA TCATTTCAAA ACAATTAATG ACAGCTACGG TCATACGGTT
GGCGATCAGG TTTTAATTCT CTGGACCAAT ATTTGCCAAC AAAATATTCG CGAAGTGGAT
ATTTTTGCTC GGCTGGGGGG GGATGAGTTT GTATTAATGC TTCCTGAAAC CAATGGGAAG
CAAGCATATC AAGTGATGGA TCGCATCCGC CAGCTCGTTA TTCAGCAATC TCTCCATCTT
CCTCAACAAG CGATCGCCAT TACCATTAGT GTTGGCATTG CAGTCTGGAC ACCTGAAATT
CTGACACTTG ATCAATTCCT TGAACGTGCT GATCGTGCTC TGTATCAAGC CAAACAGCAG
GGGCGCGATC GCATTATTTT ATTAGATACT TCTTCAGAAG AAATAATTGA ATAA
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| Protein sequence | MKIDFQTLAI TLIILNSLQT TALIIQARLM QFTPKLDRWG AGNVCFILGL ALHVFTSNNT
VSRVSADAAL ILGSALIYLG TQNILGLPHP WGRRSFQLTI LSSWAALGVI EANAPASSLS
QAILTGTIAL CSGLTARLLY FYRQQFLLIP ALFLGSIFLI ATFACSGMAM LAILDLVNDR
WIQLSFLQLA TDFQLLITST LWTFGLILTV NQQAIAVSKE EQATTEQIFD VSPDAILITQ
LSDGLIVRVN QSFLELIDQP KENVIGRSIL DLNFWKNQHD RSRMIDCLLS QGSCEDLEVG
LQRPDQSNFI GQVTAKLIKI NSKFHIISTI HDVTQRRKSE DLLRQSEERL ELAFQGSLAA
IWDWDLVTSD LYFSSRSLEI LGYQEGDIPP KISSFFSLLH PDDRIFVQSA LDAHFSSAKY
PYDVEYRIQQ KSGEYRWFQS TGIAVRDEQN KPYRMVGSTI DITRRKQAEE ALRESEQNYR
TVVNSGHVLI WLADKNGDHY YFNSVWLNFT GRSLEQELDS GSIEGVLSAD LQSYLSNYRT
AFSQHNSYKA EYRLRRHDGE YRWILEEGSP RYDTHGNFIG YIGHCLDIHD RKIAETALYR
EQEFTRILLD SLSDGVVACD AEGNLVLFNQ VARSWHSYLP PRSSASEWSA LYNIYQPNGS
DLMPTDALPL FRAFRHEIVQ DVEMMIKDPS KSERWVVCSG GPFFDDQNQF LGAVIAMRDV
TAERKTKQQL QEALVEAQRL RAALDQVSSH IYMKDLQFRY IYANRSALDF VDRSLEEILG
KDDFFFFSEE AAKLLQAIDS RVFQGEQTTE EIHLVNPKDG QLRVYLEIKT PIYESAQSSN
IIGLLGISTD ITEQKKLEQK LQQQATTDAL TGILNRRQFI TLAQAELNRI YRIQRDTSLS
LVIIDIDHFK TINDSYGHTV GDQVLILWTN ICQQNIREVD IFARLGGDEF VLMLPETNGK
QAYQVMDRIR QLVIQQSLHL PQQAIAITIS VGIAVWTPEI LTLDQFLERA DRALYQAKQQ
GRDRIILLDT SSEEIIE
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